RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 GSG1L2A8MUP6 293 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 BAG3O95817 575 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 TDO2P48775 406 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 EPHB4P54760 987 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 ERVK-9P63128 1117 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 ERVK-24P63145 666 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MECOMQ03112 1051 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 PICALMQ13492 652 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 TOB2Q14106 344 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 SNX17Q15036 470 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 GJC2Q5T442 439 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 STOX1Q6ZVD7 989 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 LCORLQ8N3X6 602 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 LLPHQ9BRT6 129 aaKnown RBP16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 OSBPL5Q9H0X9 879 aaPredicted RBP16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 ARMT1Q9H993 441 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 ATP8A2Q9NTI2 1148 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 ANAPC4Q9UJX5 808 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 REV3LO60673 3130 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MYO9BQ13459 2157 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TBC1D12O60347 775 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 PLCG2P16885 1265 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 HOXA7P31268 230 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 EVCP57679 992 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 MAP2K5Q13163 448 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 Q3C1V9 767 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 Q6ZUG5 572 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 MB21D2Q8IYB1 491 aaPredicted RBP16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 STAG1Q8WVM7 1258 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TMEM87BQ96K49 555 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 SNX27Q96L92 541 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 FLRT1Q9NZU1 646 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 RBPJLQ9UBG7 517 aa16.64■□□□□ 0.25
TRAPPC6B-206ENST00000556765 CHD7Q9P2D1 2997 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 USP17L5A8MUK1 530 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 KBTBD13C9JR72 458 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 CPA1P15085 419 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 CCDC85BQ15834 202 aaPredicted RBP16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 ME3Q16798 604 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 ARRDC4Q8NCT1 418 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TNPO1Q92973 898 aaKnown RBP16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 PAGR1Q9BTK6 254 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 PRDM12Q9H4Q4 367 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TPCN1Q9ULQ1 816 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TAF6LQ9Y6J9 622 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 GAKO14976 1311 aa16.63■□□□□ 0.25
TRAPPC6B-206ENST00000556765 SLC3A2P08195 630 aaKnown RBP16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 ITGB8P26012 769 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 MCM4P33991 863 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 PPP4CP60510 307 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 MTMR2Q13614 643 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 ALYREFQ86V81 257 aaKnown RBP16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 RGS22Q8NE09 1264 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 GTF3C6Q969F1 213 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 FAM163AQ96GL9 167 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 AS3MTQ9HBK9 375 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 EPB41L4AQ9HCS5 686 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TMOD4Q9NZQ9 345 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 ARPP21Q9UBL0 812 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 ATP6V1DQ9Y5K8 247 aa16.62■□□□□ 0.25
TRAPPC6B-206ENST00000556765 NAV1Q8NEY1 1877 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 PFKFB2O60825 505 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 BRD1O95696 1058 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 CAP2P40123 477 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 HMGN5P82970 282 aaKnown RBP16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 NBR1Q14596 966 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 SART3Q15020 963 aaKnown RBP16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 MFSD6Q6ZSS7 791 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 CCDC83Q8IWF9 413 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TRPV1Q8NER1 839 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 BRF1Q92994 677 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 MROH7-TTC4A0A0A0MT08 1334 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 FOCADQ5VW36 1801 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 ATAD5Q96QE3 1844 aa16.61■□□□□ 0.25
TRAPPC6B-206ENST00000556765 PRC1O43663 620 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 CYP2C19P33261 490 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 RCAN1P53805 252 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 BACE1P56817 501 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 HAND2P61296 217 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 ATP2B2Q01814 1243 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TLE2Q04725 743 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 FPGSQ05932 587 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 RRP1BQ14684 758 aaKnown RBP16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 SBK1Q52WX2 424 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TMEM31Q5JXX7 168 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 C1orf53Q5VUE5 145 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TMTC2Q8N394 836 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 MIGA1Q8NAN2 632 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 GTF3C2Q8WUA4 911 aaPredicted RBP16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 EPHX3Q9H6B9 360 aa16.6■□□□□ 0.25
TRAPPC6B-206ENST00000556765 TACC3Q9Y6A5 838 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms