RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-213ENST00000554776 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.86□□□□□ -1.63
SCFD1-213ENST00000554776 CBFA2T2O43439 604 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 GLI1P08151 1106 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 SYPP08247 313 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 RAC2P15153 192 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 CD247P20963 164 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 ZNF445P59923 1031 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 DUSP4Q13115 394 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 NR0B2Q15466 257 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 SREK1Q8WXA9 508 aaKnown RBP4.86□□□□□ -1.63
SCFD1-213ENST00000554776 MYLIPQ8WY64 445 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 TANGO6Q9C0B7 1094 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 FAM86C1Q9NVL1 165 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 ACTR10Q9NZ32 417 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 PCDHB10Q9UN67 800 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 ZNF451Q9Y4E5 1061 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 FHOD1Q9Y613 1164 aa4.86□□□□□ -1.63
SCFD1-213ENST00000554776 SSU72P8A0A1W2PR75 194 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 MEIS1O00470 390 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 ZNF205O95201 554 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 GSNP06396 782 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 ENDOUP21128 410 aaKnown RBP4.85□□□□□ -1.63
SCFD1-213ENST00000554776 RPL10P27635 214 aaKnown RBP4.85□□□□□ -1.63
SCFD1-213ENST00000554776 TXKP42681 527 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 SLC7A5Q01650 507 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 CHRNEQ04844 493 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 PPP2R5EQ16537 467 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 GNPTABQ3T906 1256 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 TMEM67Q5HYA8 995 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 CRTC3Q6UUV7 619 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 WAPLQ7Z5K2 1190 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 LILRA2Q8N149 483 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 OXR1Q8N573 874 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 ANKS4BQ8N8V4 417 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 ABHD4Q8TB40 342 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 HNRNPLLQ8WVV9 542 aaKnown RBP4.85□□□□□ -1.63
SCFD1-213ENST00000554776 MAP6Q96JE9 813 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 DRC1Q96MC2 740 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 HAUS7Q99871 368 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 DSCC1Q9BVC3 393 aa4.85□□□□□ -1.63
SCFD1-213ENST00000554776 A0A087WZG4 1122 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 KLF4O43474 513 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 FKTNO75072 461 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 ITGA4P13612 1032 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 VAV1P15498 845 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 TRHRP34981 398 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-213ENST00000554776 TCEAL1Q15170 157 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 TIGD5Q53EQ6 642 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 NOL9Q5SY16 702 aaKnown RBP4.84□□□□□ -1.63
SCFD1-213ENST00000554776 OGFOD2Q6N063 350 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 ZPBP2Q6X784 338 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 ANKS3Q6ZW76 656 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 SPPL2CQ8IUH8 684 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 POU5F2Q8N7G0 328 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 FCRL2Q96LA5 508 aaPredicted RBP4.84□□□□□ -1.63
SCFD1-213ENST00000554776 KLHL25Q9H0H3 589 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 FAM53CQ9NYF3 392 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCFD1-213ENST00000554776 WHRNQ9P202 907 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 ZMYM5Q9UJ78 669 aa4.84□□□□□ -1.63
SCFD1-213ENST00000554776 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 NOTOA8MTQ0 251 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 H0Y8X5 98 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 EPHX1P07099 455 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 ATP2B1P20020 1258 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 KIR2DL1P43626 348 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-213ENST00000554776 KIR2DL2P43627 348 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-213ENST00000554776 SF3A1Q15459 793 aaKnown RBP4.83□□□□□ -1.64
SCFD1-213ENST00000554776 RTP2Q5QGT7 225 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 HEATR6Q6AI08 1181 aaKnown RBP4.83□□□□□ -1.64
SCFD1-213ENST00000554776 VHLLQ6RSH7 139 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 FIBCD1Q8N539 461 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 MICAL1Q8TDZ2 1067 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 BRF1Q92994 677 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 ARMC5Q96C12 935 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 LIN37Q96GY3 246 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-213ENST00000554776 HHIPL1Q96JK4 782 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 SLC12A9Q9BXP2 914 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 RNF32Q9H0A6 362 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 C19orf44Q9H6X5 657 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 SUSD2Q9UGT4 822 aa4.83□□□□□ -1.64
SCFD1-213ENST00000554776 B2RBV5 119 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 USP2O75604 605 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 CEBPAP49715 358 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 SNX17Q15036 470 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 LARP1BQ659C4 914 aaKnown RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 CWF19L1Q69YN2 538 aaKnown RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 MRM1Q6IN84 353 aaKnown RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 KIAA1211LQ6NV74 962 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 C6orf15Q6UXA7 325 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 CELF2-AS1Q8N7Q2 184 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 SHISA4Q96DD7 197 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 CDADC1Q9BWV3 514 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 GBP3Q9H0R5 595 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 NOL6Q9H6R4 1146 aaKnown RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 CWC22Q9HCG8 908 aaKnown RBP4.82□□□□□ -1.64
SCFD1-213ENST00000554776 AP5S1Q9NUS5 200 aa4.82□□□□□ -1.64
SCFD1-213ENST00000554776 ERVK13-1Q9NX77 482 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms