RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 KCNH5Q8NCM2 988 aa5.79□□□□□ -1.48
VTI1B-203ENST00000554636 GZF1Q9H116 711 aaPredicted RBP5.79□□□□□ -1.48
VTI1B-203ENST00000554636 PCDHA4Q9UN74 947 aa5.79□□□□□ -1.48
VTI1B-203ENST00000554636 THRAP3Q9Y2W1 955 aaKnown RBP5.79□□□□□ -1.48
VTI1B-203ENST00000554636 KIF20BQ96Q89 1820 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 WDR17Q8IZU2 1322 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 PRAMEF27A3QJZ7 478 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 LEFTY1O75610 366 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 WNT11O96014 354 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 EVA1CP58658 441 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 TMF1P82094 1093 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 CYP27A1Q02318 531 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 CPSF6Q16630 551 aaKnown RBP eCLIP5.78□□□□□ -1.48
VTI1B-203ENST00000554636 MSMPQ1L6U9 139 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 ZC3H12AQ5D1E8 599 aaKnown RBP5.78□□□□□ -1.48
VTI1B-203ENST00000554636 DEFB132Q7Z7B7 95 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 NPAS4Q8IUM7 802 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.78□□□□□ -1.48
VTI1B-203ENST00000554636 FAM181AQ8N9Y4 354 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 ELMO3Q96BJ8 720 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 TERF2IPQ9NYB0 399 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 USP35Q9P2H5 1018 aa5.78□□□□□ -1.48
VTI1B-203ENST00000554636 ZC3H7BQ9UGR2 993 aaKnown RBP5.78□□□□□ -1.48
VTI1B-203ENST00000554636 SBF2Q86WG5 1849 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 TRIM37O94972 964 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 ERVK-24P63145 666 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 PTPN11Q06124 597 aaPredicted RBP5.77□□□□□ -1.49
VTI1B-203ENST00000554636 LRRC14Q15048 493 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 MEI1Q5TIA1 1274 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 TTBK2Q6IQ55 1244 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 OGFOD3Q6PK18 319 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 DNAJC14Q6Y2X3 702 aaPredicted RBP5.77□□□□□ -1.49
VTI1B-203ENST00000554636 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.77□□□□□ -1.49
VTI1B-203ENST00000554636 UBE3DQ7Z6J8 389 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 TOP6BLQ8N6T0 577 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 RNF214Q8ND24 703 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 PARP2Q9UGN5 583 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 PCOLCE2Q9UKZ9 415 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 RREB1Q92766 1687 aa5.77□□□□□ -1.49
VTI1B-203ENST00000554636 FAM208AQ9UK61 1670 aaKnown RBP5.77□□□□□ -1.49
VTI1B-203ENST00000554636 TNS2Q63HR2 1409 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 LMNB1P20700 586 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 TAGLNQ01995 201 aaKnown RBP5.76□□□□□ -1.49
VTI1B-203ENST00000554636 PSMD2Q13200 908 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 ARHGAP27Q6ZUM4 889 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 TOM1L2Q6ZVM7 507 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 SV2BQ7L1I2 683 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 FRMD6Q96NE9 622 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 CCDC39Q9UFE4 941 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 AK5Q9Y6K8 562 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 CCDC7Q96M83 1385 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 NUP188Q5SRE5 1749 aa5.76□□□□□ -1.49
VTI1B-203ENST00000554636 RGPD3A6NKT7 1758 aaPredicted RBP5.75□□□□□ -1.49
VTI1B-203ENST00000554636 RGPD2P0DJD1 1756 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 RGPD4Q7Z3J3 1758 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 OVOS2A0A0G2JMS6 1433 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 BCL9O00512 1426 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 NSD3Q9BZ95 1437 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 ANKRD26Q9UPS8 1709 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 F6X3S4 739 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 ITIH2P19823 946 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 CDK8P49336 464 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 IRAK1P51617 712 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 SEPT6Q14141 434 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 INPP5AQ14642 412 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 CCDC27Q2M243 656 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 CYP27C1Q4G0S4 372 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 LRFN4Q6PJG9 635 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 FAM196AQ6ZSG2 479 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 TP53INP2Q8IXH6 220 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 PLD6Q8N2A8 252 aaKnown RBP5.75□□□□□ -1.49
VTI1B-203ENST00000554636 FLCNQ8NFG4 579 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 PLPPR2Q96GM1 343 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 DUSP23Q9BVJ7 150 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 CACNA2D2Q9NY47 1150 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 CYP8B1Q9UNU6 501 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 PCDHB5Q9Y5E4 795 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 U3KQE9 123 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 RTL1A6NKG5 1358 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 SRCAPQ6ZRS2 3230 aa5.75□□□□□ -1.49
VTI1B-203ENST00000554636 MAP3K19Q56UN5 1328 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 SHANK3Q9BYB0 1731 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 FYB1O15117 783 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 HSPA5P11021 654 aaKnown RBP5.74□□□□□ -1.49
VTI1B-203ENST00000554636 FBLN1P23142 703 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 FGD1P98174 961 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 COL19A1Q14993 1142 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 WIPI1Q5MNZ9 446 aaPredicted RBP5.74□□□□□ -1.49
VTI1B-203ENST00000554636 CDC37L1Q7L3B6 337 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 VSIG10LQ86VR7 867 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 ABI1Q8IZP0 508 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 ANKRD24Q8TF21 1146 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 IP6K1Q92551 441 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 GAL3ST3Q96A11 431 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 COG3Q96JB2 828 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 BSDC1Q9NW68 430 aaPredicted RBP5.74□□□□□ -1.49
VTI1B-203ENST00000554636 PARD3Q8TEW0 1356 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 NHSQ6T4R5 1651 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 LRP5O75197 1615 aa5.74□□□□□ -1.49
VTI1B-203ENST00000554636 HOXC9P31274 260 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms