RNA–Protein interactions for RNA: ENST00000549243.5

SLC48A1-207, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 577 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-207ENST00000549243 PCDH10Q9P2E7 1040 aa23.22■■□□□ 1.31
SLC48A1-207ENST00000549243 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.22■■□□□ 1.31
SLC48A1-207ENST00000549243 CTDP1Q9Y5B0 961 aaPredicted RBP23.22■■□□□ 1.31
SLC48A1-207ENST00000549243 TSPY2A6NKD2 308 aa23.21■■□□□ 1.31
SLC48A1-207ENST00000549243 NMIQ13287 307 aaPredicted RBP23.21■■□□□ 1.31
SLC48A1-207ENST00000549243 LRRC26Q2I0M4 334 aa23.21■■□□□ 1.31
SLC48A1-207ENST00000549243 GMCL1P1Q8NEA9 526 aa23.21■■□□□ 1.31
SLC48A1-207ENST00000549243 SENP6Q9GZR1 1112 aaPredicted RBP23.21■■□□□ 1.31
SLC48A1-207ENST00000549243 RIPK3Q9Y572 518 aa23.21■■□□□ 1.31
SLC48A1-207ENST00000549243 TACC3Q9Y6A5 838 aa23.21■■□□□ 1.31
SLC48A1-207ENST00000549243 RANBP6O60518 1105 aaKnown RBP23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 NMT2O60551 498 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 ZBED4O75132 1171 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 MYCNP04198 464 aaPredicted RBP23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 BMP3P12645 472 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 COPB2P35606 906 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 MCMDC2Q4G0Z9 681 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 GJC2Q5T442 439 aaPredicted RBP23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 CHD1LQ86WJ1 897 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 RAVER2Q9HCJ3 691 aaKnown RBP23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 FEM1BQ9UK73 627 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 STX8Q9UNK0 236 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 MCM3APO60318 1980 aa23.2■■□□□ 1.3
SLC48A1-207ENST00000549243 SEPT4O43236 478 aa23.19■■□□□ 1.3
SLC48A1-207ENST00000549243 ZNF792Q3KQV3 632 aa23.19■■□□□ 1.3
SLC48A1-207ENST00000549243 ZNF589Q86UQ0 364 aaPredicted RBP23.19■■□□□ 1.3
SLC48A1-207ENST00000549243 TOMM22Q9NS69 142 aa23.19■■□□□ 1.3
SLC48A1-207ENST00000549243 SYNPO2Q9UMS6 1093 aa23.19■■□□□ 1.3
SLC48A1-207ENST00000549243 DNAH12Q6ZR08 3092 aa23.18■■□□□ 1.3
SLC48A1-207ENST00000549243 TMEM232C9JQI7 657 aa23.18■■□□□ 1.3
SLC48A1-207ENST00000549243 ATN1P54259 1190 aaPredicted RBP23.18■■□□□ 1.3
SLC48A1-207ENST00000549243 PLEKHM2Q8IWE5 1019 aa23.18■■□□□ 1.3
SLC48A1-207ENST00000549243 TINF2Q9BSI4 451 aa23.18■■□□□ 1.3
SLC48A1-207ENST00000549243 SLC38A10Q9HBR0 1119 aa23.18■■□□□ 1.3
SLC48A1-207ENST00000549243 IL17RBQ9NRM6 502 aa23.18■■□□□ 1.3
SLC48A1-207ENST00000549243 ANAPC4Q9UJX5 808 aa23.18■■□□□ 1.3
SLC48A1-207ENST00000549243 DNM1LO00429 736 aa23.17■■□□□ 1.3
SLC48A1-207ENST00000549243 FGAP02671 866 aa23.17■■□□□ 1.3
SLC48A1-207ENST00000549243 MCCP23508 829 aa23.17■■□□□ 1.3
SLC48A1-207ENST00000549243 NUCB1Q02818 461 aa23.17■■□□□ 1.3
SLC48A1-207ENST00000549243 IKQ13123 557 aaPredicted RBP23.17■■□□□ 1.3
SLC48A1-207ENST00000549243 ALX1Q15699 326 aa23.17■■□□□ 1.3
SLC48A1-207ENST00000549243 DDX11Q96FC9 970 aa23.17■■□□□ 1.3
SLC48A1-207ENST00000549243 MTMR7Q9Y216 660 aa23.17■■□□□ 1.3
SLC48A1-207ENST00000549243 HSPD1P10809 573 aaKnown RBP23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 TAL1P17542 331 aaPredicted RBP23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 SLC1A4P43007 532 aa23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 RRP12Q5JTH9 1297 aaKnown RBP23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 RASGRP2Q7LDG7 609 aa23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 ARRDC4Q8NCT1 418 aa23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 DIS3Q9Y2L1 958 aaKnown RBP23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 SUPT16HQ9Y5B9 1047 aaKnown RBP23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 SZT2Q5T011 3432 aa23.16■■□□□ 1.3
SLC48A1-207ENST00000549243 CCDC171Q6TFL3 1326 aa23.15■■□□□ 1.3
SLC48A1-207ENST00000549243 KBTBD13C9JR72 458 aa23.15■■□□□ 1.3
SLC48A1-207ENST00000549243 ATP2A1O14983 1001 aa23.15■■□□□ 1.3
SLC48A1-207ENST00000549243 HAND2P61296 217 aa23.15■■□□□ 1.3
SLC48A1-207ENST00000549243 KCTD1Q719H9 257 aa23.15■■□□□ 1.3
SLC48A1-207ENST00000549243 GDF15Q99988 308 aa23.15■■□□□ 1.3
SLC48A1-207ENST00000549243 HOMER2Q9NSB8 354 aa23.15■■□□□ 1.3
SLC48A1-207ENST00000549243 ORC4O43929 436 aa23.14■■□□□ 1.29
SLC48A1-207ENST00000549243 MAGEA10P43363 369 aaPredicted RBP23.14■■□□□ 1.29
SLC48A1-207ENST00000549243 STAT2P52630 851 aa23.14■■□□□ 1.29
SLC48A1-207ENST00000549243 PPP4R3BQ5MIZ7 849 aa23.14■■□□□ 1.29
SLC48A1-207ENST00000549243 GMCL1Q96IK5 515 aa23.14■■□□□ 1.29
SLC48A1-207ENST00000549243 SDSP20132 328 aa23.13■■□□□ 1.29
SLC48A1-207ENST00000549243 TICAM2Q86XR7 235 aa23.13■■□□□ 1.29
SLC48A1-207ENST00000549243 ANKRD35Q8N283 1001 aa23.13■■□□□ 1.29
SLC48A1-207ENST00000549243 CHURC1Q8WUH1 139 aa23.13■■□□□ 1.29
SLC48A1-207ENST00000549243 A0A1W2PPC1 479 aa23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 SNAP25P60880 206 aa23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 LRRC41Q15345 812 aa23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 FAM160B2Q86V87 743 aa23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 STAG1Q8WVM7 1258 aa23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 LENG1Q96BZ8 264 aaPredicted RBP23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 OSBPL3Q9H4L5 887 aa23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 NRBP1Q9UHY1 535 aa23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 CNPY2Q9Y2B0 182 aa23.12■■□□□ 1.29
SLC48A1-207ENST00000549243 LAMA4Q16363 1823 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 DNAJC25-GNG10A0A024R161 153 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 FGRP09769 529 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 ZNF865P0CJ78 1059 aaPredicted RBP23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 RARBP10826 455 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 ADCYAP1R1P41586 468 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 OAZ1P54368 228 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 RTP1P59025 263 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 RCSD1Q6JBY9 416 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 CHST13Q8NET6 341 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 FERMT2Q96AC1 680 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 AGBL1Q96MI9 1066 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 XPNPEP3Q9NQH7 507 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 FBXO40Q9UH90 709 aa23.11■■□□□ 1.29
SLC48A1-207ENST00000549243 ZMYM6O95789 1325 aa23.1■■□□□ 1.29
SLC48A1-207ENST00000549243 SOX1O00570 391 aaPredicted RBP23.1■■□□□ 1.29
SLC48A1-207ENST00000549243 PGK1P00558 417 aa23.1■■□□□ 1.29
SLC48A1-207ENST00000549243 BMP8BP34820 402 aa23.1■■□□□ 1.29
SLC48A1-207ENST00000549243 IRX6P78412 446 aaPredicted RBP23.1■■□□□ 1.29
SLC48A1-207ENST00000549243 MDM2Q00987 491 aaPredicted RBP23.1■■□□□ 1.29
SLC48A1-207ENST00000549243 CCDC96Q2M329 555 aa23.1■■□□□ 1.29
SLC48A1-207ENST00000549243 CCDC174Q6PII3 467 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms