RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 CHST7Q9NS84 486 aa9.17□□□□□ -0.94
LEMD3-206ENST00000545026 MINPP1Q9UNW1 487 aa9.17□□□□□ -0.94
LEMD3-206ENST00000545026 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
LEMD3-206ENST00000545026 CD2APQ9Y5K6 639 aa9.17□□□□□ -0.94
LEMD3-206ENST00000545026 TRBV23-1A0A0A0MS06 115 aa9.16□□□□□ -0.94
LEMD3-206ENST00000545026 SHISA3A0PJX4 238 aa9.16□□□□□ -0.94
LEMD3-206ENST00000545026 PABPC1P11940 636 aaKnown RBP9.16□□□□□ -0.94
LEMD3-206ENST00000545026 GRB10Q13322 594 aa9.16□□□□□ -0.94
LEMD3-206ENST00000545026 RNF187Q5TA31 235 aaPredicted RBP9.16□□□□□ -0.94
LEMD3-206ENST00000545026 GTF2IRD2BQ6EKJ0 949 aa9.16□□□□□ -0.94
LEMD3-206ENST00000545026 GTF2IRD2Q86UP8 949 aa9.16□□□□□ -0.94
LEMD3-206ENST00000545026 BTN2A2Q8WVV5 523 aa9.16□□□□□ -0.94
LEMD3-206ENST00000545026 U3KQE9 123 aa9.16□□□□□ -0.94
LEMD3-206ENST00000545026 PRODHO43272 600 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 SRFP11831 508 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 NFIAQ12857 509 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 PLA2G4EQ3MJ16 856 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 DALRD3Q5D0E6 543 aaKnown RBP9.15□□□□□ -0.94
LEMD3-206ENST00000545026 DUSP27Q5VZP5 1158 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 NSMFQ6X4W1 530 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 GPATCH3Q96I76 525 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 ZDHHC15Q96MV8 337 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 DBNDD2Q9BQY9 259 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 IER2Q9BTL4 223 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 DSCC1Q9BVC3 393 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 HDAC8Q9BY41 377 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 PRKAB1Q9Y478 270 aa9.15□□□□□ -0.94
LEMD3-206ENST00000545026 GNAT3A8MTJ3 354 aa9.14□□□□□ -0.95
LEMD3-206ENST00000545026 H0Y8X5 98 aa9.14□□□□□ -0.95
LEMD3-206ENST00000545026 OXCT1P55809 520 aa9.14□□□□□ -0.95
LEMD3-206ENST00000545026 CBX2Q14781 532 aaPredicted RBP9.14□□□□□ -0.95
LEMD3-206ENST00000545026 SF1Q15637 639 aaKnown RBP9.14□□□□□ -0.95
LEMD3-206ENST00000545026 ENOX1Q8TC92 643 aaKnown RBP9.14□□□□□ -0.95
LEMD3-206ENST00000545026 IPO9Q96P70 1041 aaKnown RBP9.14□□□□□ -0.95
LEMD3-206ENST00000545026 GPR62Q9BZJ7 368 aa9.14□□□□□ -0.95
LEMD3-206ENST00000545026 ASCC2Q9H1I8 757 aaPredicted RBP9.14□□□□□ -0.95
LEMD3-206ENST00000545026 DUSP15Q9H1R2 295 aaPredicted RBP9.14□□□□□ -0.95
LEMD3-206ENST00000545026 NKX2-4Q9H2Z4 354 aa9.14□□□□□ -0.95
LEMD3-206ENST00000545026 NCOA5Q9HCD5 579 aaKnown RBP9.14□□□□□ -0.95
LEMD3-206ENST00000545026 IFT57Q9NWB7 429 aa9.14□□□□□ -0.95
LEMD3-206ENST00000545026 SF3B6Q9Y3B4 125 aaKnown RBP9.14□□□□□ -0.95
LEMD3-206ENST00000545026 DLX3O60479 287 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 VAMP4O75379 141 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 HSP90B1P14625 803 aaKnown RBP9.13□□□□□ -0.95
LEMD3-206ENST00000545026 CTSKP43235 329 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 C21orf62-AS1Q17RA5 79 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 NKPD1Q17RQ9 610 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 FILIP1Q7Z7B0 1213 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 FAM181AQ8N9Y4 354 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 DAGLBQ8NCG7 672 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 PLAAQ9Y263 795 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 ST14Q9Y5Y6 855 aa9.13□□□□□ -0.95
LEMD3-206ENST00000545026 DNAJC25-GNG10A0A024R161 153 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 FAM155AB1AL88 458 aaPredicted RBP9.12□□□□□ -0.95
LEMD3-206ENST00000545026 WDR64B1ANS9 1081 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 MEIS1O00470 390 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 PLD2O14939 933 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 DNAJC6O75061 913 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 RFPL3O75679 317 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 H2AFB1P0C5Y9 115 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 H2AFB2P0C5Z0 115 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 HOXC12P31275 282 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 MASP1P48740 699 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 GFRA1P56159 465 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 SUMO1P63165 101 aaKnown RBP9.12□□□□□ -0.95
LEMD3-206ENST00000545026 AMPD2Q01433 879 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 CYP4F3Q08477 520 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 TAF7LQ5H9L4 462 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 SHKBP1Q8TBC3 707 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 METTL22Q9BUU2 404 aaPredicted RBP9.12□□□□□ -0.95
LEMD3-206ENST00000545026 TMX1Q9H3N1 280 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 MKNK2Q9HBH9 465 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 SPC25Q9HBM1 224 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 CYP26B1Q9NR63 512 aa9.12□□□□□ -0.95
LEMD3-206ENST00000545026 GPR55Q9Y2T6 319 aaPredicted RBP9.12□□□□□ -0.95
LEMD3-206ENST00000545026 GDF11O95390 407 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 RAPGEF3O95398 923 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 IGLV1-40P01703 118 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 SCG5P05408 212 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 GSNP06396 782 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 PABPC4Q13310 644 aaKnown RBP eCLIP9.11□□□□□ -0.95
LEMD3-206ENST00000545026 PTPROQ16827 1216 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 CLEC16AQ2KHT3 1053 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 ZNF655Q8N720 491 aaPredicted RBP9.11□□□□□ -0.95
LEMD3-206ENST00000545026 NINJ1Q92982 152 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 MCMBPQ9BTE3 642 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 OSBPL1AQ9BXW6 950 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 ATG3Q9NT62 314 aa9.11□□□□□ -0.95
LEMD3-206ENST00000545026 PPM1GO15355 546 aaPredicted RBP9.1□□□□□ -0.95
LEMD3-206ENST00000545026 HMGB1P09429 215 aaKnown RBP9.1□□□□□ -0.95
LEMD3-206ENST00000545026 C6orf222P0C671 652 aaPredicted RBP9.1□□□□□ -0.95
LEMD3-206ENST00000545026 ITIH2P19823 946 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 FSTP19883 344 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 MAP4K2Q12851 820 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 DOC2BQ14184 412 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 DPY19L1Q2PZI1 675 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 FNDC3BQ53EP0 1204 aaKnown RBP9.1□□□□□ -0.95
LEMD3-206ENST00000545026 CRTC3Q6UUV7 619 aa9.1□□□□□ -0.95
LEMD3-206ENST00000545026 SPACA3Q8IXA5 215 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms