RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 FOXN1O15353 648 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 EEF1GP26641 437 aaKnown RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 HNRNPH2P55795 449 aaKnown RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 ALX1Q15699 326 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 ZNF658Q5TYW1 1059 aaPredicted RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 CC2D1AQ6P1N0 951 aaPredicted RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 METTL16Q86W50 562 aaKnown RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 EXOC4Q96A65 974 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 ZCCHC17Q9NP64 241 aaKnown RBP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 STK36Q9NRP7 1315 aa9.14□□□□□ -0.95
PRKAB1-207ENST00000542698 KLRF2D3W0D1 207 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 MFAP3LO75121 409 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 TECP42680 631 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 CALCRLQ16602 461 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 B4GALNT4Q76KP1 1039 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 TGFBRAP1Q8WUH2 860 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 EPC1Q9H2F5 836 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 GPCPD1Q9NPB8 672 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 TUBE1Q9UJT0 475 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 NEDD4P46934 1319 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 ATP2C2O75185 946 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 TCP1P17987 556 aaKnown RBP9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 RPL13P26373 211 aaKnown RBP9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 CASP1P29466 404 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 ACTN2P35609 894 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 DYNLL1P63167 89 aaKnown RBP9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 GALNT17Q6IS24 598 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 RGS22Q8NE09 1264 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 STAG1Q8WVM7 1258 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 CDCA7Q9BWT1 371 aaPredicted RBP9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 RWDD2AQ9UIY3 292 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 ADAM21Q9UKJ8 722 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 SOS2Q07890 1332 aaPredicted RBP9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 SPDYE3A6NKU9 549 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 ERVV-1B6SEH8 477 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 SEMA3EO15041 775 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 NDUFA10O95299 355 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 OR52Z1P0C646 297 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 KRT31Q15323 416 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 VWA3BQ502W6 1294 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 HS2ST1Q7LGA3 356 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 MAPKAPK5Q8IW41 473 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 PPM1EQ8WY54 764 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 CTNNBL1Q8WYA6 563 aaPredicted RBP9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 HINFPQ9BQA5 517 aa9.13□□□□□ -0.95
PRKAB1-207ENST00000542698 B4DLN1 442 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 KLHL30Q0D2K2 578 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 DCAF17Q5H9S7 520 aaPredicted RBP9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 CCDC155Q8N6L0 562 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 RETREG2Q8NC44 543 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 RASGRP4Q8TDF6 673 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 IPO4Q8TEX9 1081 aaKnown RBP9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 WDR24Q96S15 920 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 ZC3H12CQ9C0D7 883 aaKnown RBP9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 NUCKS1Q9H1E3 243 aaKnown RBP9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 RIPOR2Q9Y4F9 1068 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 CYP2D7A0A087X1C5 515 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 TLDC2A0PJX2 215 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 TEX33O43247 280 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 TADA3O75528 432 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 POTEJP0CG39 1038 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 PRPHP41219 470 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 EIF6P56537 245 aaKnown RBP9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 PAK2Q13177 524 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 CPLX4Q7Z7G2 160 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 ANKRD13CQ8N6S4 541 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 OXER1Q8TDS5 423 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 MTA3Q9BTC8 594 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 SLC39A2Q9NP94 309 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 TSKSQ9UJT2 592 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 FAN1Q9Y2M0 1017 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 ADGRG1Q9Y653 693 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 CLTCQ00610 1675 aaKnown RBP9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 HPDP32754 393 aaPredicted RBP9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 CASP8Q14790 479 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 SFMBT2Q5VUG0 894 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 CCDC121Q6ZUS5 278 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 NEK8Q86SG6 692 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 GPATCH11Q8N954 259 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 IGDCC4Q8TDY8 1250 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 DHTKD1Q96HY7 919 aaPredicted RBP9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 ABCB6Q9NP58 842 aa9.12□□□□□ -0.95
PRKAB1-207ENST00000542698 NPHP4O75161 1426 aaPredicted RBP9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 GSG1L2A8MUP6 293 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 PRR29P0C7W0 189 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 GOLGA8HP0CJ92 632 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 ANTXR2P58335 489 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 CCDC26Q8TAB7 109 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 PLVAPQ9BX97 442 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 FAM204AQ9H8W3 233 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 TBC1D7Q9P0N9 293 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 BIN2Q9UBW5 565 aaPredicted RBP9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 HYOU1Q9Y4L1 999 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 KIF20BQ96Q89 1820 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 GNPATO15228 680 aa9.11□□□□□ -0.95
PRKAB1-207ENST00000542698 ZMYND10O75800 440 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms