RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 FAM227BQ96M60 508 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 TOMM22Q9NS69 142 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 PCDH10Q9P2E7 1040 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 NRBP1Q9UHY1 535 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.97■■□□□ 1.43
DDB1-220ENST00000542337 PFASO15067 1338 aa23.96■■□□□ 1.43
DDB1-220ENST00000542337 A0A0D9SFI3 127 aa23.96■■□□□ 1.43
DDB1-220ENST00000542337 ATP2A1O14983 1001 aa23.96■■□□□ 1.43
DDB1-220ENST00000542337 FOXP2O15409 715 aa23.96■■□□□ 1.43
DDB1-220ENST00000542337 PGK2P07205 417 aa23.96■■□□□ 1.43
DDB1-220ENST00000542337 SLC1A4P43007 532 aa23.96■■□□□ 1.43
DDB1-220ENST00000542337 IKQ13123 557 aaPredicted RBP23.96■■□□□ 1.43
DDB1-220ENST00000542337 SENP6Q9GZR1 1112 aaPredicted RBP23.96■■□□□ 1.43
DDB1-220ENST00000542337 ZNF236Q9UL36 1845 aa23.96■■□□□ 1.43
DDB1-220ENST00000542337 GREB1LQ9C091 1923 aaPredicted RBP23.95■■□□□ 1.42
DDB1-220ENST00000542337 DNM1LO00429 736 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 FGAP02671 866 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 NMIQ13287 307 aaPredicted RBP23.95■■□□□ 1.42
DDB1-220ENST00000542337 ZNF792Q3KQV3 632 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 PRAMEF19Q5SWL8 479 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 FAM160B2Q86V87 743 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 GMCL1Q96IK5 515 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 TINF2Q9BSI4 451 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 SLC38A10Q9HBR0 1119 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 FBXO40Q9UH90 709 aa23.95■■□□□ 1.42
DDB1-220ENST00000542337 ZMYND8Q9ULU4 1186 aaPredicted RBP23.95■■□□□ 1.42
DDB1-220ENST00000542337 SUPT16HQ9Y5B9 1047 aaKnown RBP23.95■■□□□ 1.42
DDB1-220ENST00000542337 TMEM232C9JQI7 657 aa23.94■■□□□ 1.42
DDB1-220ENST00000542337 ORC4O43929 436 aa23.94■■□□□ 1.42
DDB1-220ENST00000542337 HSPD1P10809 573 aaKnown RBP23.94■■□□□ 1.42
DDB1-220ENST00000542337 STAT2P52630 851 aa23.94■■□□□ 1.42
DDB1-220ENST00000542337 OAZ1P54368 228 aa23.94■■□□□ 1.42
DDB1-220ENST00000542337 PLEKHM2Q8IWE5 1019 aa23.94■■□□□ 1.42
DDB1-220ENST00000542337 OSBPL3Q9H4L5 887 aa23.94■■□□□ 1.42
DDB1-220ENST00000542337 RAVER2Q9HCJ3 691 aaKnown RBP23.94■■□□□ 1.42
DDB1-220ENST00000542337 INCENPQ9NQS7 918 aa23.94■■□□□ 1.42
DDB1-220ENST00000542337 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
DDB1-220ENST00000542337 A0A1W2PPC1 479 aa23.93■■□□□ 1.42
DDB1-220ENST00000542337 KBTBD13C9JR72 458 aa23.93■■□□□ 1.42
DDB1-220ENST00000542337 MYCNP04198 464 aaPredicted RBP23.93■■□□□ 1.42
DDB1-220ENST00000542337 SDSP20132 328 aa23.93■■□□□ 1.42
DDB1-220ENST00000542337 MCCP23508 829 aa23.93■■□□□ 1.42
DDB1-220ENST00000542337 STAG1Q8WVM7 1258 aa23.93■■□□□ 1.42
DDB1-220ENST00000542337 CNPY2Q9Y2B0 182 aa23.93■■□□□ 1.42
DDB1-220ENST00000542337 RIPK3Q9Y572 518 aa23.93■■□□□ 1.42
DDB1-220ENST00000542337 HIP1O00291 1037 aa23.92■■□□□ 1.42
DDB1-220ENST00000542337 RRP12Q5JTH9 1297 aaKnown RBP23.92■■□□□ 1.42
DDB1-220ENST00000542337 ANO1Q5XXA6 986 aa23.92■■□□□ 1.42
DDB1-220ENST00000542337 ANKRD35Q8N283 1001 aa23.92■■□□□ 1.42
DDB1-220ENST00000542337 MSL3Q8N5Y2 521 aaKnown RBP23.92■■□□□ 1.42
DDB1-220ENST00000542337 CHST13Q8NET6 341 aa23.92■■□□□ 1.42
DDB1-220ENST00000542337 PRO3102Q9H379 93 aa23.92■■□□□ 1.42
DDB1-220ENST00000542337 DIAPH3Q9NSV4 1193 aa23.92■■□□□ 1.42
DDB1-220ENST00000542337 FGRP09769 529 aa23.91■■□□□ 1.42
DDB1-220ENST00000542337 RARBP10826 455 aa23.91■■□□□ 1.42
DDB1-220ENST00000542337 PCP11498 1178 aaKnown RBP23.91■■□□□ 1.42
DDB1-220ENST00000542337 LRRC26Q2I0M4 334 aa23.91■■□□□ 1.42
DDB1-220ENST00000542337 GJC2Q5T442 439 aaPredicted RBP23.91■■□□□ 1.42
DDB1-220ENST00000542337 RCSD1Q6JBY9 416 aa23.91■■□□□ 1.42
DDB1-220ENST00000542337 IL17RBQ9NRM6 502 aa23.91■■□□□ 1.42
DDB1-220ENST00000542337 ZMYM6O95789 1325 aa23.9■■□□□ 1.42
DDB1-220ENST00000542337 NMT2O60551 498 aa23.9■■□□□ 1.42
DDB1-220ENST00000542337 PLA2G6O60733 806 aa23.9■■□□□ 1.42
DDB1-220ENST00000542337 SYN1P17600 705 aa23.9■■□□□ 1.42
DDB1-220ENST00000542337 MFSD6Q6ZSS7 791 aa23.9■■□□□ 1.42
DDB1-220ENST00000542337 ZNF589Q86UQ0 364 aaPredicted RBP23.9■■□□□ 1.42
DDB1-220ENST00000542337 CHMP4CQ96CF2 233 aa23.9■■□□□ 1.42
DDB1-220ENST00000542337 KCTD1Q719H9 257 aa23.89■■□□□ 1.41
DDB1-220ENST00000542337 RNF41Q9H4P4 317 aaPredicted RBP23.89■■□□□ 1.41
DDB1-220ENST00000542337 MTMR7Q9Y216 660 aa23.89■■□□□ 1.41
DDB1-220ENST00000542337 PARP14Q460N5 1801 aa23.89■■□□□ 1.41
DDB1-220ENST00000542337 AKR1A1P14550 325 aa23.88■■□□□ 1.41
DDB1-220ENST00000542337 BMP8BP34820 402 aa23.88■■□□□ 1.41
DDB1-220ENST00000542337 ATN1P54259 1190 aaPredicted RBP23.88■■□□□ 1.41
DDB1-220ENST00000542337 HAND2P61296 217 aa23.88■■□□□ 1.41
DDB1-220ENST00000542337 CCDC96Q2M329 555 aa23.88■■□□□ 1.41
DDB1-220ENST00000542337 DCAF4Q8WV16 495 aa23.88■■□□□ 1.41
DDB1-220ENST00000542337 GDF15Q99988 308 aa23.88■■□□□ 1.41
DDB1-220ENST00000542337 XPNPEP3Q9NQH7 507 aa23.88■■□□□ 1.41
DDB1-220ENST00000542337 TCP11L1Q9NUJ3 509 aa23.88■■□□□ 1.41
DDB1-220ENST00000542337 SYNGAP1Q96PV0 1343 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 MYH4Q9Y623 1939 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 DNAJC25-GNG10A0A024R161 153 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 TOP1P11387 765 aaKnown RBP23.87■■□□□ 1.41
DDB1-220ENST00000542337 TKFCQ3LXA3 575 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 AKNAD1Q5T1N1 836 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 CWC27Q6UX04 472 aaKnown RBP23.87■■□□□ 1.41
DDB1-220ENST00000542337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.87■■□□□ 1.41
DDB1-220ENST00000542337 ZNF467Q7Z7K2 595 aaPredicted RBP23.87■■□□□ 1.41
DDB1-220ENST00000542337 RNF180Q86T96 592 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 ACAD9Q9H845 621 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 HOMER2Q9NSB8 354 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 PRKAG2Q9UGJ0 569 aa23.87■■□□□ 1.41
DDB1-220ENST00000542337 COL11A1P12107 1806 aaPredicted RBP23.87■■□□□ 1.41
DDB1-220ENST00000542337 TRIOBPQ9H2D6 2365 aa23.86■■□□□ 1.41
DDB1-220ENST00000542337 ZNF213O14771 459 aa23.86■■□□□ 1.41
DDB1-220ENST00000542337 NOVP48745 357 aa23.86■■□□□ 1.41
DDB1-220ENST00000542337 LRRC41Q15345 812 aa23.86■■□□□ 1.41
DDB1-220ENST00000542337 MAMDC4Q6UXC1 1216 aa23.86■■□□□ 1.41
DDB1-220ENST00000542337 TACC3Q9Y6A5 838 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms