RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 GMCL1Q96IK5 515 aa23.82■■□□□ 1.4
COPS7A-208ENST00000538410 SPZ1Q9BXG8 430 aa23.82■■□□□ 1.4
COPS7A-208ENST00000538410 GOPCQ9HD26 462 aa23.82■■□□□ 1.4
COPS7A-208ENST00000538410 PICK1Q9NRD5 415 aa23.82■■□□□ 1.4
COPS7A-208ENST00000538410 V9GY48 417 aaPredicted RBP23.82■■□□□ 1.4
COPS7A-208ENST00000538410 RAD21O60216 631 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 GJA5P36382 358 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 SLC1A4P43007 532 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 VGLL4Q14135 290 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 CCDC96Q2M329 555 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 SLC35G1Q2M3R5 365 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 RGS22Q8NE09 1264 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 ABHD8Q96I13 439 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 C8orf76Q96K31 380 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 AIFM3Q96NN9 605 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 GPCPD1Q9NPB8 672 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 MYH15Q9Y2K3 1946 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 H3BQV1 296 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 CYTH3O43739 400 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 ALDH1A1P00352 501 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 PTPRAP18433 802 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 DGKZQ13574 1117 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 VCPKMTQ9H867 229 aa23.81■■□□□ 1.4
COPS7A-208ENST00000538410 RBM27Q9P2N5 1060 aaKnown RBP23.81■■□□□ 1.4
COPS7A-208ENST00000538410 FOSBP53539 338 aa23.8■■□□□ 1.4
COPS7A-208ENST00000538410 PKN1Q16512 942 aa23.8■■□□□ 1.4
COPS7A-208ENST00000538410 FOXD4L5Q5VV16 416 aaPredicted RBP23.8■■□□□ 1.4
COPS7A-208ENST00000538410 KCTD1Q719H9 257 aa23.8■■□□□ 1.4
COPS7A-208ENST00000538410 IFNL1Q8IU54 200 aa23.8■■□□□ 1.4
COPS7A-208ENST00000538410 FOXD4L4Q8WXT5 416 aaPredicted RBP23.8■■□□□ 1.4
COPS7A-208ENST00000538410 TNPO1Q92973 898 aaKnown RBP23.8■■□□□ 1.4
COPS7A-208ENST00000538410 WDR18Q9BV38 432 aa23.8■■□□□ 1.4
COPS7A-208ENST00000538410 CPVLQ9H3G5 476 aa23.8■■□□□ 1.4
COPS7A-208ENST00000538410 AS3MTQ9HBK9 375 aa23.8■■□□□ 1.4
COPS7A-208ENST00000538410 PTPRFP10586 1907 aa23.79■■□□□ 1.4
COPS7A-208ENST00000538410 hCG_1642624A0A1W2PR95 340 aa23.79■■□□□ 1.4
COPS7A-208ENST00000538410 FBXO18Q8NFZ0 1043 aa23.79■■□□□ 1.4
COPS7A-208ENST00000538410 MCOLN1Q9GZU1 580 aa23.79■■□□□ 1.4
COPS7A-208ENST00000538410 UBA5Q9GZZ9 404 aa23.79■■□□□ 1.4
COPS7A-208ENST00000538410 RIOX1Q9H6W3 641 aa23.79■■□□□ 1.4
COPS7A-208ENST00000538410 TCHHQ07283 1943 aa23.79■■□□□ 1.4
COPS7A-208ENST00000538410 BMP3P12645 472 aa23.78■■□□□ 1.4
COPS7A-208ENST00000538410 KIAA1755Q5JYT7 1200 aa23.78■■□□□ 1.4
COPS7A-208ENST00000538410 TTBK2Q6IQ55 1244 aa23.78■■□□□ 1.4
COPS7A-208ENST00000538410 FEZ1Q99689 392 aa23.78■■□□□ 1.4
COPS7A-208ENST00000538410 CFHR5Q9BXR6 569 aa23.78■■□□□ 1.4
COPS7A-208ENST00000538410 F13A1P00488 732 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 ZYXQ15942 572 aaKnown RBP23.77■■□□□ 1.4
COPS7A-208ENST00000538410 OTUD7BQ6GQQ9 843 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 CNKSR2Q8WXI2 1034 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 KIAA1683Q9H0B3 1180 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 GJB4Q9NTQ9 266 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 SNCAIPQ9Y6H5 919 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 SCG2P13521 617 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 GUCY1B3Q02153 619 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 PFKFB3Q16875 520 aaPredicted RBP23.77■■□□□ 1.4
COPS7A-208ENST00000538410 SPICE1Q8N0Z3 855 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 ZNF280CQ8ND82 737 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 OTUD5Q96G74 571 aa23.77■■□□□ 1.4
COPS7A-208ENST00000538410 NUP88Q99567 741 aaPredicted RBP23.77■■□□□ 1.4
COPS7A-208ENST00000538410 ISY1Q9ULR0 285 aaKnown RBP23.77■■□□□ 1.4
COPS7A-208ENST00000538410 USP17L10C9JJH3 530 aa23.76■■□□□ 1.39
COPS7A-208ENST00000538410 GPR25O00155 361 aa23.76■■□□□ 1.39
COPS7A-208ENST00000538410 IGF2BP3O00425 579 aaKnown RBP eCLIP23.76■■□□□ 1.39
COPS7A-208ENST00000538410 TRIM29Q14134 588 aa23.76■■□□□ 1.39
COPS7A-208ENST00000538410 NOM1Q5C9Z4 860 aaKnown RBP23.76■■□□□ 1.39
COPS7A-208ENST00000538410 ZNF296Q8WUU4 475 aaPredicted RBP23.76■■□□□ 1.39
COPS7A-208ENST00000538410 PIBF1Q8WXW3 757 aa23.76■■□□□ 1.39
COPS7A-208ENST00000538410 ZHX2Q9Y6X8 837 aa23.76■■□□□ 1.39
COPS7A-208ENST00000538410 TESPA1A2RU30 521 aaPredicted RBP23.75■■□□□ 1.39
COPS7A-208ENST00000538410 SPDYE5A6NIY4 337 aa23.75■■□□□ 1.39
COPS7A-208ENST00000538410 SPP2Q13103 211 aa23.75■■□□□ 1.39
COPS7A-208ENST00000538410 KRT40Q6A162 431 aa23.75■■□□□ 1.39
COPS7A-208ENST00000538410 ERO1BQ86YB8 467 aa23.75■■□□□ 1.39
COPS7A-208ENST00000538410 RRP36Q96EU6 259 aaKnown RBP23.75■■□□□ 1.39
COPS7A-208ENST00000538410 VAT1LQ9HCJ6 419 aa23.75■■□□□ 1.39
COPS7A-208ENST00000538410 PARP14Q460N5 1801 aa23.75■■□□□ 1.39
COPS7A-208ENST00000538410 XBP1P17861 261 aa23.74■■□□□ 1.39
COPS7A-208ENST00000538410 SLC16A2P36021 539 aa23.74■■□□□ 1.39
COPS7A-208ENST00000538410 GTF2A2P52657 109 aa23.74■■□□□ 1.39
COPS7A-208ENST00000538410 USP14P54578 494 aa23.74■■□□□ 1.39
COPS7A-208ENST00000538410 ADGRF4Q8IZF3 695 aa23.74■■□□□ 1.39
COPS7A-208ENST00000538410 LPAR1Q92633 364 aa23.74■■□□□ 1.39
COPS7A-208ENST00000538410 MS4A4AQ96JQ5 239 aa23.74■■□□□ 1.39
COPS7A-208ENST00000538410 JMJD4Q9H9V9 463 aa23.74■■□□□ 1.39
COPS7A-208ENST00000538410 TMEM232C9JQI7 657 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 BACE1P56817 501 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 MTMR2Q13614 643 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 FAM83BQ5T0W9 1011 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 BTNL9Q6UXG8 535 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 PIGSQ96S52 555 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 R3HDMLQ9H3Y0 253 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 AFG3L2Q9Y4W6 797 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 CTU1Q7Z7A3 348 aaKnown RBP23.73■■□□□ 1.39
COPS7A-208ENST00000538410 FERMT3Q86UX7 667 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 HOMER1Q86YM7 354 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 PTPN18Q99952 460 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 VPS54Q9P1Q0 977 aa23.73■■□□□ 1.39
COPS7A-208ENST00000538410 SEC63Q9UGP8 760 aaKnown RBP23.73■■□□□ 1.39
COPS7A-208ENST00000538410 CLEC17AQ6ZS10 378 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms