RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 ZNF865P0CJ78 1059 aaPredicted RBP27.25■■□□□ 1.95
PKP3-210ENST00000533249 LRRFIP1Q32MZ4 808 aaKnown RBP27.25■■□□□ 1.95
PKP3-210ENST00000533249 RNF180Q86T96 592 aa27.25■■□□□ 1.95
PKP3-210ENST00000533249 IFNL3Q8IZI9 196 aa27.25■■□□□ 1.95
PKP3-210ENST00000533249 KIFC2Q96AC6 838 aa27.25■■□□□ 1.95
PKP3-210ENST00000533249 CEP95Q96GE4 821 aa27.25■■□□□ 1.95
PKP3-210ENST00000533249 SEC62Q99442 399 aaKnown RBP27.25■■□□□ 1.95
PKP3-210ENST00000533249 PDLIM7Q9NR12 457 aa27.25■■□□□ 1.95
PKP3-210ENST00000533249 PHF24Q9UPV7 400 aa27.25■■□□□ 1.95
PKP3-210ENST00000533249 PATL2C9JE40 543 aaKnown RBP27.24■■□□□ 1.95
PKP3-210ENST00000533249 ZBED4O75132 1171 aa27.24■■□□□ 1.95
PKP3-210ENST00000533249 AKR1A1P14550 325 aa27.24■■□□□ 1.95
PKP3-210ENST00000533249 SH3RF1Q7Z6J0 888 aa27.24■■□□□ 1.95
PKP3-210ENST00000533249 LRRC47Q8N1G4 583 aaKnown RBP27.24■■□□□ 1.95
PKP3-210ENST00000533249 BADQ92934 168 aa27.24■■□□□ 1.95
PKP3-210ENST00000533249 TTC41PQ6P2S7 1318 aa27.23■■□□□ 1.95
PKP3-210ENST00000533249 DLL1O00548 723 aa27.23■■□□□ 1.95
PKP3-210ENST00000533249 TLE2Q04725 743 aa27.23■■□□□ 1.95
PKP3-210ENST00000533249 SHHQ15465 462 aa27.23■■□□□ 1.95
PKP3-210ENST00000533249 OTUD7AQ8TE49 926 aaPredicted RBP27.23■■□□□ 1.95
PKP3-210ENST00000533249 NACAP1Q9BZK3 213 aa27.23■■□□□ 1.95
PKP3-210ENST00000533249 RAVER2Q9HCJ3 691 aaKnown RBP27.23■■□□□ 1.95
PKP3-210ENST00000533249 MTMR4Q9NYA4 1195 aa27.23■■□□□ 1.95
PKP3-210ENST00000533249 TRIM43BA6NCK2 446 aa27.22■■□□□ 1.95
PKP3-210ENST00000533249 ERC2O15083 957 aa27.22■■□□□ 1.95
PKP3-210ENST00000533249 CENPBP07199 599 aaPredicted RBP27.22■■□□□ 1.95
PKP3-210ENST00000533249 C1orf53Q5VUE5 145 aa27.22■■□□□ 1.95
PKP3-210ENST00000533249 TRIM43Q96BQ3 446 aaPredicted RBP27.22■■□□□ 1.95
PKP3-210ENST00000533249 FSD1Q9BTV5 496 aa27.22■■□□□ 1.95
PKP3-210ENST00000533249 PCDHB15Q9Y5E8 787 aa27.22■■□□□ 1.95
PKP3-210ENST00000533249 TTLL1O95922 423 aa27.21■■□□□ 1.95
PKP3-210ENST00000533249 C9orf50Q5SZB4 431 aa27.21■■□□□ 1.95
PKP3-210ENST00000533249 PI4K2BQ8TCG2 481 aa27.21■■□□□ 1.95
PKP3-210ENST00000533249 MKL1Q969V6 931 aa27.21■■□□□ 1.95
PKP3-210ENST00000533249 FAM161BQ96MY7 647 aa27.21■■□□□ 1.95
PKP3-210ENST00000533249 FEM1BQ9UK73 627 aa27.21■■□□□ 1.95
PKP3-210ENST00000533249 ISY1Q9ULR0 285 aaKnown RBP27.21■■□□□ 1.95
PKP3-210ENST00000533249 POTEB2H3BUK9 544 aa27.2■■□□□ 1.94
PKP3-210ENST00000533249 ATP2A1O14983 1001 aa27.2■■□□□ 1.94
PKP3-210ENST00000533249 SNAI1O95863 264 aaPredicted RBP27.2■■□□□ 1.94
PKP3-210ENST00000533249 TSPY3P0CV98 308 aa27.2■■□□□ 1.94
PKP3-210ENST00000533249 TSPY8P0CW00 308 aa27.2■■□□□ 1.94
PKP3-210ENST00000533249 MSL3Q8N5Y2 521 aaKnown RBP27.2■■□□□ 1.94
PKP3-210ENST00000533249 NAPBQ9H115 298 aa27.2■■□□□ 1.94
PKP3-210ENST00000533249 ZHX1Q9UKY1 873 aaPredicted RBP27.2■■□□□ 1.94
PKP3-210ENST00000533249 SYNGAP1Q96PV0 1343 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 DNAJC25-GNG10A0A024R161 153 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 A0A1W2PQ45 241 aaPredicted RBP27.19■■□□□ 1.94
PKP3-210ENST00000533249 A0A1W2PQY0 241 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 ADAMTS4O75173 837 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 PDE4BQ07343 736 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 SLFN13Q68D06 897 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 FAM109BQ6ICB4 259 aaPredicted RBP27.19■■□□□ 1.94
PKP3-210ENST00000533249 NEDD1Q8NHV4 660 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 SLC38A10Q9HBR0 1119 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 FAM184BQ9ULE4 1060 aa27.19■■□□□ 1.94
PKP3-210ENST00000533249 PQBP1O60828 265 aaKnown RBP27.18■■□□□ 1.94
PKP3-210ENST00000533249 SLC3A2P08195 630 aaKnown RBP27.18■■□□□ 1.94
PKP3-210ENST00000533249 TFAP4Q01664 338 aa27.18■■□□□ 1.94
PKP3-210ENST00000533249 ZMYM1Q5SVZ6 1142 aa27.18■■□□□ 1.94
PKP3-210ENST00000533249 ANKRD35Q8N283 1001 aa27.18■■□□□ 1.94
PKP3-210ENST00000533249 GMCL1P1Q8NEA9 526 aa27.18■■□□□ 1.94
PKP3-210ENST00000533249 CHMP4CQ96CF2 233 aa27.18■■□□□ 1.94
PKP3-210ENST00000533249 SYNPO2Q9UMS6 1093 aa27.18■■□□□ 1.94
PKP3-210ENST00000533249 TACC3Q9Y6A5 838 aa27.18■■□□□ 1.94
PKP3-210ENST00000533249 PLIN4Q96Q06 1357 aa27.18■■□□□ 1.94
PKP3-210ENST00000533249 SYNRGQ9UMZ2 1314 aa27.17■■□□□ 1.94
PKP3-210ENST00000533249 CLTBP09497 229 aa27.17■■□□□ 1.94
PKP3-210ENST00000533249 BMP3P12645 472 aa27.17■■□□□ 1.94
PKP3-210ENST00000533249 PPARAQ07869 468 aa27.17■■□□□ 1.94
PKP3-210ENST00000533249 MAMDC4Q6UXC1 1216 aa27.17■■□□□ 1.94
PKP3-210ENST00000533249 GUCD1Q96NT3 240 aa27.17■■□□□ 1.94
PKP3-210ENST00000533249 MX1P20591 662 aa27.16■■□□□ 1.94
PKP3-210ENST00000533249 ITGB8P26012 769 aa27.16■■□□□ 1.94
PKP3-210ENST00000533249 ZNF697Q5TEC3 545 aa27.16■■□□□ 1.94
PKP3-210ENST00000533249 HOMER2Q9NSB8 354 aa27.16■■□□□ 1.94
PKP3-210ENST00000533249 FBXO40Q9UH90 709 aa27.16■■□□□ 1.94
PKP3-210ENST00000533249 TMEM232C9JQI7 657 aa27.15■■□□□ 1.94
PKP3-210ENST00000533249 ACLYP53396 1101 aa27.15■■□□□ 1.94
PKP3-210ENST00000533249 ZNF467Q7Z7K2 595 aaPredicted RBP27.15■■□□□ 1.94
PKP3-210ENST00000533249 CHST13Q8NET6 341 aa27.15■■□□□ 1.94
PKP3-210ENST00000533249 TSEN34Q9BSV6 310 aaKnown RBP27.15■■□□□ 1.94
PKP3-210ENST00000533249 STARD7Q9NQZ5 370 aa27.15■■□□□ 1.94
PKP3-210ENST00000533249 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.15■■□□□ 1.94
PKP3-210ENST00000533249 MCM3APO60318 1980 aa27.15■■□□□ 1.94
PKP3-210ENST00000533249 RAG1P15918 1043 aa27.14■■□□□ 1.94
PKP3-210ENST00000533249 OAZ1P54368 228 aa27.14■■□□□ 1.94
PKP3-210ENST00000533249 IKQ13123 557 aaPredicted RBP27.14■■□□□ 1.94
PKP3-210ENST00000533249 ACVR2BQ13705 512 aa27.14■■□□□ 1.94
PKP3-210ENST00000533249 CCDC129Q6ZRS4 1044 aa27.14■■□□□ 1.94
PKP3-210ENST00000533249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.14■■□□□ 1.947e-7■■■■□ 23
PKP3-210ENST00000533249 FGD4Q96M96 766 aa27.14■■□□□ 1.94
PKP3-210ENST00000533249 MYADML2A6NDP7 307 aa27.13■■□□□ 1.93
PKP3-210ENST00000533249 KCNA10Q16322 511 aa27.13■■□□□ 1.93
PKP3-210ENST00000533249 KLHDC9Q8NEP7 349 aa27.13■■□□□ 1.93
PKP3-210ENST00000533249 NUP133Q8WUM0 1156 aa27.13■■□□□ 1.93
PKP3-210ENST00000533249 TMEM39AQ9NV64 488 aa27.13■■□□□ 1.93
PKP3-210ENST00000533249 LAMA2P24043 3122 aaKnown RBP27.12■■□□□ 1.93
PKP3-210ENST00000533249 KIAA0355O15063 1070 aa27.12■■□□□ 1.93
PKP3-210ENST00000533249 DUSP11O75319 330 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 544.9 ms