RNA–Protein interactions for RNA: ENST00000532490.1

LDLRAD3-205, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-205ENST00000532490 RIPK3Q9Y572 518 aa18.76■□□□□ 0.59
LDLRAD3-205ENST00000532490 RANBP2P49792 3224 aaKnown RBP18.76■□□□□ 0.59
LDLRAD3-205ENST00000532490 ZMYM6O95789 1325 aa18.75■□□□□ 0.59
LDLRAD3-205ENST00000532490 NMT2O60551 498 aa18.75■□□□□ 0.59
LDLRAD3-205ENST00000532490 COPB2P35606 906 aa18.75■□□□□ 0.59
LDLRAD3-205ENST00000532490 ZNF792Q3KQV3 632 aa18.75■□□□□ 0.59
LDLRAD3-205ENST00000532490 MMP19Q99542 508 aa18.75■□□□□ 0.59
LDLRAD3-205ENST00000532490 TEX13BQ9BXU2 312 aa18.75■□□□□ 0.59
LDLRAD3-205ENST00000532490 SLC38A10Q9HBR0 1119 aa18.75■□□□□ 0.59
LDLRAD3-205ENST00000532490 CCDC171Q6TFL3 1326 aa18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 PLXNA1Q9UIW2 1896 aa18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 TSPY2A6NKD2 308 aa18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 MSCO60682 206 aa18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 PGK2P07205 417 aa18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 BMP3P12645 472 aa18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 SNRNP48Q6IEG0 339 aaKnown RBP18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 CHRDL2Q6WN34 429 aa18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 DIS3Q9Y2L1 958 aaKnown RBP18.74■□□□□ 0.59
LDLRAD3-205ENST00000532490 TRIOBPQ9H2D6 2365 aa18.73■□□□□ 0.59
LDLRAD3-205ENST00000532490 ZBED4O75132 1171 aa18.73■□□□□ 0.59
LDLRAD3-205ENST00000532490 CNGA1P29973 690 aa18.73■□□□□ 0.59
LDLRAD3-205ENST00000532490 KCTD2Q14681 263 aa18.73■□□□□ 0.59
LDLRAD3-205ENST00000532490 PPP4R3BQ5MIZ7 849 aa18.73■□□□□ 0.59
LDLRAD3-205ENST00000532490 PRAMEF19Q5SWL8 479 aa18.73■□□□□ 0.59
LDLRAD3-205ENST00000532490 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.73■□□□□ 0.59
LDLRAD3-205ENST00000532490 KIFC2Q96AC6 838 aa18.73■□□□□ 0.59
LDLRAD3-205ENST00000532490 TMEM232C9JQI7 657 aa18.72■□□□□ 0.59
LDLRAD3-205ENST00000532490 SEPT4O43236 478 aa18.72■□□□□ 0.59
LDLRAD3-205ENST00000532490 RANBP6O60518 1105 aaKnown RBP18.72■□□□□ 0.59
LDLRAD3-205ENST00000532490 RAVER2Q9HCJ3 691 aaKnown RBP18.72■□□□□ 0.59
LDLRAD3-205ENST00000532490 RBM27Q9P2N5 1060 aaKnown RBP18.72■□□□□ 0.59
LDLRAD3-205ENST00000532490 STX8Q9UNK0 236 aa18.72■□□□□ 0.59
LDLRAD3-205ENST00000532490 SMCHD1A6NHR9 2005 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 DNAJC25-GNG10A0A024R161 153 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 PLA2G6O60733 806 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 MCCP23508 829 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 PDE4AP27815 886 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 FXR1P51114 621 aaKnown RBP eCLIP18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 OAZ1P54368 228 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 CPXCR1Q8N123 301 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 STAG1Q8WVM7 1258 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 TINF2Q9BSI4 451 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 TCP11L1Q9NUJ3 509 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 NRBP1Q9UHY1 535 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 DNAH12Q6ZR08 3092 aa18.71■□□□□ 0.59
LDLRAD3-205ENST00000532490 FDX1P10109 184 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 SLC1A4P43007 532 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 STAT2P52630 851 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 HAND2P61296 217 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 RCSD1Q6JBY9 416 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 RASGRP2Q7LDG7 609 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 C7orf61Q8IZ16 206 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 CHURC1Q8WUH1 139 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 ZNF536O15090 1300 aa18.7■□□□□ 0.58
LDLRAD3-205ENST00000532490 DNM1LO00429 736 aa18.69■□□□□ 0.58
LDLRAD3-205ENST00000532490 MFAP1P55081 439 aaKnown RBP18.69■□□□□ 0.58
LDLRAD3-205ENST00000532490 LRRC26Q2I0M4 334 aa18.69■□□□□ 0.58
LDLRAD3-205ENST00000532490 CWC27Q6UX04 472 aaKnown RBP18.69■□□□□ 0.58
LDLRAD3-205ENST00000532490 KCTD1Q719H9 257 aa18.69■□□□□ 0.58
LDLRAD3-205ENST00000532490 FAM160B2Q86V87 743 aa18.69■□□□□ 0.58
LDLRAD3-205ENST00000532490 TBC1D10CQ8IV04 446 aa18.69■□□□□ 0.58
LDLRAD3-205ENST00000532490 ZNF865P0CJ78 1059 aaPredicted RBP18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 PCP11498 1178 aaKnown RBP18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 TAL1P17542 331 aaPredicted RBP18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 IRX6P78412 446 aaPredicted RBP18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 RRP12Q5JTH9 1297 aaKnown RBP18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 AKNAD1Q5T1N1 836 aa18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 ANO1Q5XXA6 986 aa18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 MAMDC4Q6UXC1 1216 aa18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 MSL3Q8N5Y2 521 aaKnown RBP18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 CHST13Q8NET6 341 aa18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 CHMP4CQ96CF2 233 aa18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 TMEM47Q9BQJ4 181 aa18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 CTDP1Q9Y5B0 961 aaPredicted RBP18.68■□□□□ 0.58
LDLRAD3-205ENST00000532490 HIP1O00291 1037 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 SLC4A3P48751 1232 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 GJC2Q5T442 439 aaPredicted RBP18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 MFSD6Q6ZSS7 791 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 ARRDC4Q8NCT1 418 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 DDX11Q96FC9 970 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 FGD4Q96M96 766 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 GDF15Q99988 308 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 SENP6Q9GZR1 1112 aaPredicted RBP18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 TOMM22Q9NS69 142 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 DIAPH3Q9NSV4 1193 aa18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 ZMYND8Q9ULU4 1186 aaPredicted RBP18.67■□□□□ 0.58
LDLRAD3-205ENST00000532490 SNAI1O95863 264 aaPredicted RBP18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 TOP1P11387 765 aaKnown RBP18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 GSPT1P15170 499 aaKnown RBP18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 ZNF467Q7Z7K2 595 aaPredicted RBP18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 DCAF4Q8WV16 495 aa18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 AGBL1Q96MI9 1066 aa18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 IL25Q9H293 177 aa18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 FBXO40Q9UH90 709 aa18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 PRR12Q9ULL5 1215 aa18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 SYNGAP1Q96PV0 1343 aa18.66■□□□□ 0.58
LDLRAD3-205ENST00000532490 LAMA4Q16363 1823 aa18.65■□□□□ 0.58
LDLRAD3-205ENST00000532490 SZT2Q5T011 3432 aa18.65■□□□□ 0.58
LDLRAD3-205ENST00000532490 LRRC41Q15345 812 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms