RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 SF3A3Q12874 501 aaKnown RBP eCLIP17.11■□□□□ 0.332e-7■■■■■ 27.2
USP35-203ENST00000529308 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
USP35-203ENST00000529308 ALAS1P13196 640 aa17.11■□□□□ 0.33
USP35-203ENST00000529308 SNAP25P60880 206 aa17.11■□□□□ 0.33
USP35-203ENST00000529308 KIDINS220Q9ULH0 1771 aa17.11■□□□□ 0.33
USP35-203ENST00000529308 ENC1O14682 589 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 DESP17661 470 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 SLC9C1Q4G0N8 1177 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 MB21D2Q8IYB1 491 aaPredicted RBP17.1■□□□□ 0.33
USP35-203ENST00000529308 GJA10Q969M2 543 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 IFIH1Q9BYX4 1025 aaKnown RBP17.1■□□□□ 0.33
USP35-203ENST00000529308 MAN1B1Q9UKM7 699 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 RAD17O75943 681 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 NEBLO76041 1014 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 KRT5P13647 590 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 GUCY1A2P33402 732 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 CYP2J2P51589 502 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 CCDC50Q8IVM0 306 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 KLHL7Q8IXQ5 586 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 SEPT12Q8IYM1 358 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 SH3RF3Q8TEJ3 882 aaPredicted RBP17.1■□□□□ 0.33
USP35-203ENST00000529308 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
USP35-203ENST00000529308 KIAA1024Q9UPX6 916 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 PTPRUQ92729 1446 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 GTPBP6O43824 516 aaPredicted RBP17.1■□□□□ 0.33
USP35-203ENST00000529308 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 BCS1LQ9Y276 419 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 PABPC4Q13310 644 aaKnown RBP eCLIP17.1■□□□□ 0.33
USP35-203ENST00000529308 ENAHQ8N8S7 591 aaPredicted RBP17.1■□□□□ 0.33
USP35-203ENST00000529308 OGFRQ9NZT2 677 aa17.1■□□□□ 0.33
USP35-203ENST00000529308 GAS7O60861 476 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 USP37Q86T82 979 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 NLGN1Q8N2Q7 840 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 DDX25Q9UHL0 483 aaKnown RBP17.09■□□□□ 0.33
USP35-203ENST00000529308 B4DLN1 442 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 FOXN1O15353 648 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 SLFN14P0C7P3 912 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 CCDC84Q86UT8 332 aaPredicted RBP17.09■□□□□ 0.33
USP35-203ENST00000529308 SENP2Q9HC62 589 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 ATP6V0A2Q9Y487 856 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 PDE6BP35913 854 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 TRIM14Q14142 442 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 UBE2SQ16763 222 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 CERS3Q8IU89 383 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 MYOCDQ8IZQ8 938 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 CSRNP1Q96S65 589 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 PAIP2Q9BPZ3 127 aaKnown RBP17.09■□□□□ 0.33
USP35-203ENST00000529308 NCAPD2Q15021 1401 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 ADGRB1O14514 1584 aa17.09■□□□□ 0.33
USP35-203ENST00000529308 BUB1O43683 1085 aa17.08■□□□□ 0.33
USP35-203ENST00000529308 CEP104O60308 925 aa17.08■□□□□ 0.33
USP35-203ENST00000529308 ABCB4P21439 1286 aa17.08■□□□□ 0.33
USP35-203ENST00000529308 GRIPAP1Q4V328 841 aa17.08■□□□□ 0.33
USP35-203ENST00000529308 ARHGEF1Q92888 912 aaKnown RBP17.08■□□□□ 0.33
USP35-203ENST00000529308 SH2D4AQ9H788 454 aa17.08■□□□□ 0.33
USP35-203ENST00000529308 BAZ2BQ9UIF8 2168 aaKnown RBP17.08■□□□□ 0.33
USP35-203ENST00000529308 C1orf167Q5SNV9 1468 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 ZNF609O15014 1411 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 TESPA1A2RU30 521 aaPredicted RBP17.08■□□□□ 0.32
USP35-203ENST00000529308 KIF28PB7ZC32 967 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 MEIS1O00470 390 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 TNFAIP3P21580 790 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 FBXO11Q86XK2 927 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 TMEM87AQ8NBN3 555 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 GSDMAQ96QA5 445 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 LY9Q9HBG7 655 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 PICK1Q9NRD5 415 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 INO80Q9ULG1 1556 aaPredicted RBP17.08■□□□□ 0.32
USP35-203ENST00000529308 IQSEC2Q5JU85 1478 aa17.08■□□□□ 0.32
USP35-203ENST00000529308 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
USP35-203ENST00000529308 CAMSAP1Q5T5Y3 1602 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 MMP10P09238 476 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 C8orf74Q6P047 294 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 MIGA2Q7L4E1 593 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 FNBP1Q96RU3 617 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 TUBGCP2Q9BSJ2 902 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
USP35-203ENST00000529308 TRPC5Q9UL62 973 aaPredicted RBP17.07■□□□□ 0.32
USP35-203ENST00000529308 GDAQ9Y2T3 454 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 COPB1P53618 953 aaKnown RBP17.07■□□□□ 0.32
USP35-203ENST00000529308 FAM26FQ5R3K3 315 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 LMBR1Q8WVP7 490 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 PCDHA4Q9UN74 947 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.07■□□□□ 0.32
USP35-203ENST00000529308 LAMC1P11047 1609 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 H7C1D1 291 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 SEMA3EO15041 775 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 SPOPO43791 374 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 RPS6KA4O75676 772 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 HPDP32754 393 aaPredicted RBP17.07■□□□□ 0.32
USP35-203ENST00000529308 CDK8P49336 464 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
USP35-203ENST00000529308 NAA30Q147X3 362 aaPredicted RBP17.07■□□□□ 0.32
USP35-203ENST00000529308 ASIC2Q16515 512 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 ABCB5Q2M3G0 1257 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 CLEC4GQ6UXB4 293 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 GSTA5Q7RTV2 222 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 NIM1KQ8IY84 436 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 TRIML1Q8N9V2 468 aa17.07■□□□□ 0.32
USP35-203ENST00000529308 FAM84BQ96KN1 310 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms