RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ZKSCAN5Q9Y2L8 839 aa21.08■□□□□ 0.97
TRAPPC9-210ENST00000521667 ATRNL1Q5VV63 1379 aa21.08■□□□□ 0.96
TRAPPC9-210ENST00000521667 GREB1LQ9C091 1923 aaPredicted RBP21.08■□□□□ 0.96
TRAPPC9-210ENST00000521667 SIPA1L1O43166 1804 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 FAM196BA6NMK8 535 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 hCG_1984214I3L0E3 225 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 RAD17O75943 681 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 MCM7P33993 719 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 ZNF543Q08ER8 600 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 TATDN1Q6P1N9 297 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 ZNF713Q8N859 430 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 COL4A5P29400 1685 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 PSMD14O00487 310 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 MDM2Q00987 491 aaPredicted RBP21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 DALRD3Q5D0E6 543 aaKnown RBP21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 C6orf50Q9HD87 102 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 SERTAD1Q9UHV2 236 aa21.07■□□□□ 0.96
TRAPPC9-210ENST00000521667 COL2A1P02458 1487 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 GNA11P29992 359 aa21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 ATP2B2Q01814 1243 aa21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 AOPEPQ8N6M6 819 aa21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 GMLQ99445 158 aa21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 TRIM5Q9C035 493 aa21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 GPCPD1Q9NPB8 672 aa21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 HDAC9Q9UKV0 1011 aa21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 PSME4Q14997 1843 aa21.06■□□□□ 0.96
TRAPPC9-210ENST00000521667 VWA3AA6NCI4 1184 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 SMCO2A6NFE2 343 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 KANK3Q6NY19 840 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 SARM1Q6SZW1 724 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 PLA2G4DQ86XP0 818 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 PDILTQ8N807 584 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 SYMPKQ92797 1274 aaKnown RBP21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 EPSTI1Q96J88 318 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 KANSL2Q9H9L4 492 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 SPDYE2BA6NHP3 402 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 ACTN4O43707 911 aaKnown RBP21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 SPDYE6P0CI01 402 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 ZNF75DP51815 510 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 POSTNQ15063 836 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 GPATCH4Q5T3I0 446 aaKnown RBP21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 ARL6IP4Q66PJ3 421 aaKnown RBP21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 NLGN2Q8NFZ4 835 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 TMOD2Q9NZR1 351 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 NYAP2Q9P242 653 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 PCDHA5Q9Y5H7 936 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 UTRNP46939 3433 aa21.05■□□□□ 0.96
TRAPPC9-210ENST00000521667 ESYT2A0FGR8 921 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 FOXN1O15353 648 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 KRT25Q7Z3Z0 450 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 C4orf32Q8N8J7 132 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 MKL1Q969V6 931 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 ZNRF3Q9ULT6 936 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 CD2APQ9Y5K6 639 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 INF2Q27J81 1249 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 NIM1KQ8IY84 436 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 OGFOD1Q8N543 542 aa21.04■□□□□ 0.96
TRAPPC9-210ENST00000521667 EEF2P13639 858 aaKnown RBP21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 DLGAP5Q15398 846 aa21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 CCDC96Q2M329 555 aa21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 ISM2Q6H9L7 571 aa21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 TMEM179Q6ZVK1 233 aa21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 CCDC34Q96HJ3 373 aa21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 BCS1LQ9Y276 419 aa21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.03■□□□□ 0.96
TRAPPC9-210ENST00000521667 A0A087X0B3 334 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 GOLGA6L6A8MZA4 724 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 SHROOM1Q2M3G4 852 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 ADGRF4Q8IZF3 695 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 DHX58Q96C10 678 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 JMJD4Q9H9V9 463 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 NONOQ15233 471 aaKnown RBP eCLIP21.02■□□□□ 0.964e-6■■■■□ 25.3
TRAPPC9-210ENST00000521667 IL17AQ16552 155 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 ABCB5Q2M3G0 1257 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 NT5DC1Q5TFE4 455 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 TTBK2Q6IQ55 1244 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 ILDR2Q71H61 639 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 SPC24Q8NBT2 197 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 CSRNP1Q96S65 589 aa21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 ZBTB12Q9Y330 459 aaPredicted RBP21.02■□□□□ 0.96
TRAPPC9-210ENST00000521667 PNMA6FA0A0J9YX94 578 aa21.01■□□□□ 0.95
TRAPPC9-210ENST00000521667 SLFN14P0C7P3 912 aa21.01■□□□□ 0.95
TRAPPC9-210ENST00000521667 PRR29P0C7W0 189 aa21.01■□□□□ 0.95
TRAPPC9-210ENST00000521667 ICA1Q05084 483 aa21.01■□□□□ 0.95
TRAPPC9-210ENST00000521667 SEPT2Q15019 361 aa21.01■□□□□ 0.95
TRAPPC9-210ENST00000521667 ZNF70Q9UC06 446 aaPredicted RBP21.01■□□□□ 0.95
TRAPPC9-210ENST00000521667 SMTNL1A8MU46 457 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 TCP10L2B9ZVM9 353 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 GDF11O95390 407 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 TPM3P06753 285 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 LONP1P36776 959 aaKnown RBP21■□□□□ 0.95
TRAPPC9-210ENST00000521667 PPP1R18Q6NYC8 613 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 KCTD1Q719H9 257 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 REXO1Q8N1G1 1221 aaKnown RBP21■□□□□ 0.95
TRAPPC9-210ENST00000521667 AGBL3Q8NEM8 1001 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 DCAF4Q8WV16 495 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 SRCAPQ6ZRS2 3230 aa21■□□□□ 0.95
TRAPPC9-210ENST00000521667 FER1L6Q2WGJ9 1857 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms