RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 EPB41L4AQ9HCS5 686 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-203ENST00000517534 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
CTNNA1-203ENST00000517534 XPNPEP3Q9NQH7 507 aa10.01□□□□□ -0.81
CTNNA1-203ENST00000517534 PRDM5Q9NQX1 630 aaPredicted RBP10.01□□□□□ -0.81
CTNNA1-203ENST00000517534 NYAP2Q9P242 653 aa10.01□□□□□ -0.81
CTNNA1-203ENST00000517534 RIPK3Q9Y572 518 aa10.01□□□□□ -0.81
CTNNA1-203ENST00000517534 NAV1Q8NEY1 1877 aa10.01□□□□□ -0.81
CTNNA1-203ENST00000517534 DNAJC25-GNG10A0A024R161 153 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 MINDY4BA8MYZ0 360 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 ATP2A1O14983 1001 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 RNF113AO15541 343 aaKnown RBP10□□□□□ -0.81
CTNNA1-203ENST00000517534 SNAI1O95863 264 aaPredicted RBP10□□□□□ -0.81
CTNNA1-203ENST00000517534 COPB2P35606 906 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 EPHB4P54760 987 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 TSHZ3Q63HK5 1081 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 CCSAPQ6IQ19 270 aaPredicted RBP10□□□□□ -0.81
CTNNA1-203ENST00000517534 RNF180Q86T96 592 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 STK11IPQ8N1F8 1099 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 KLHDC9Q8NEP7 349 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 APPBP2Q92624 585 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 LENG1Q96BZ8 264 aaPredicted RBP10□□□□□ -0.81
CTNNA1-203ENST00000517534 FAM161BQ96MY7 647 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 SLF1Q9BQI6 1058 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 TEX13BQ9BXU2 312 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 DCTPP1Q9H773 170 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 MKNK2Q9HBH9 465 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 ROBO3Q96MS0 1386 aa10□□□□□ -0.81
CTNNA1-203ENST00000517534 M0R2C6 588 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 KIAA0355O15063 1070 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 GPAA1O43292 621 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 RAD21O60216 631 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 AKR1A1P14550 325 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 MAMDC4Q6UXC1 1216 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 MSL3Q8N5Y2 521 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 PRPF38AQ8NAV1 312 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 FGD4Q96M96 766 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 CDX2Q99626 313 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 TTYH1Q9H313 450 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 SEMA6BQ9H3T3 888 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 SLC38A10Q9HBR0 1119 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 CLIP2Q9UDT6 1046 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 TACC3Q9Y6A5 838 aa9.99□□□□□ -0.81
CTNNA1-203ENST00000517534 FRMPD3Q5JV73 1810 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 A0A1W2PQ45 241 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 A0A1W2PQY0 241 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 PATL2C9JE40 543 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 PRDM1O75626 825 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 ZFYP08048 801 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 CLTBP09497 229 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 ACLYP53396 1101 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 IRX5P78411 483 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 FAAP100Q0VG06 881 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 ZNF697Q5TEC3 545 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 SNRNP48Q6IEG0 339 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 ANKRD33Q7Z3H0 272 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 ZNF467Q7Z7K2 595 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 IFNL3Q8IZI9 196 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 CPXCR1Q8N123 301 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 CEP95Q96GE4 821 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 TOX2Q96NM4 488 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 TSEN34Q9BSV6 310 aaKnown RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 COL25A1Q9BXS0 654 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 MTMR4Q9NYA4 1195 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 FAM184BQ9ULE4 1060 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 CIZ1Q9ULV3 898 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 CNPY2Q9Y2B0 182 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 SYNGAP1Q96PV0 1343 aa9.98□□□□□ -0.81
CTNNA1-203ENST00000517534 MYADML2A6NDP7 307 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 ADCY6O43306 1168 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 PQBP1O60828 265 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 ZBED4O75132 1171 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 GNAT2P19087 354 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 CDK7P50613 346 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 ACVR2BQ13705 512 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 KCNA10Q16322 511 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 ZNF444Q8N0Y2 327 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 GMCL1P1Q8NEA9 526 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 NEDD1Q8NHV4 660 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 DDX11Q96FC9 970 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 SEC62Q99442 399 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 KATNBL1Q9H079 304 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 RAVER2Q9HCJ3 691 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 TMEM39AQ9NV64 488 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 FEM1BQ9UK73 627 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 SYNPO2Q9UMS6 1093 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 SYNRGQ9UMZ2 1314 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 SMCHD1A6NHR9 2005 aa9.97□□□□□ -0.81
CTNNA1-203ENST00000517534 BAZ2AQ9UIF9 1905 aaKnown RBP9.96□□□□□ -0.81
CTNNA1-203ENST00000517534 MOXD2PA6NHM9 499 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 CTAGE5O15320 804 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 DUSP11O75319 330 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 TTLL1O95922 423 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 RAG1P15918 1043 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 CST5P28325 142 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 TDO2P48775 406 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 OAZ1P54368 228 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms