RNA–Protein interactions for RNA: ENST00000516543.1

SNORA40.14-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 86 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.14-201ENST00000516543 LINC00116Q8NCU8 138 aa4.36□□□□□ -1.71
SNORA40.14-201ENST00000516543 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.36□□□□□ -1.71
SNORA40.14-201ENST00000516543 CNNM2Q9H8M5 875 aa4.36□□□□□ -1.71
SNORA40.14-201ENST00000516543 GMIPQ9P107 970 aa4.36□□□□□ -1.71
SNORA40.14-201ENST00000516543 SSU72P8A0A1W2PR75 194 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 FAM86C2PA6NEL3 165 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 FADS2P1A8MWK0 482 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 SIGLEC6O43699 453 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 CTSKP43235 329 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 KIR2DL1P43626 348 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 KIR2DL2P43627 348 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 RNF4P78317 190 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 HSF5Q4G112 596 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 ZNF385BQ569K4 471 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 TCERG1LQ5VWI1 586 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 NLRC3Q7RTR2 1065 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 EHMT1Q9H9B1 1298 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 SIRT5Q9NXA8 310 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 GFOD1Q9NXC2 390 aa4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 GPR55Q9Y2T6 319 aaPredicted RBP4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 SUPT16HQ9Y5B9 1047 aaKnown RBP4.35□□□□□ -1.71
SNORA40.14-201ENST00000516543 CLEC3AO75596 197 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 PNLIPP16233 465 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 CDR1P51861 262 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 RTP1P59025 263 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 MLECQ14165 292 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 TMEFF1Q8IYR6 380 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 TMEM52Q8NDY8 209 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 RELTQ969Z4 430 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 DACT3Q96B18 629 aaPredicted RBP4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 SIGLEC10Q96LC7 697 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 SLC6A18Q96N87 628 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 CRTAC1Q9NQ79 661 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 CHST7Q9NS84 486 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 ERVK13-1Q9NX77 482 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 KLHL14Q9P2G3 628 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 GGT7Q9UJ14 662 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 IRAK3Q9Y616 596 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 ROBO2Q9HCK4 1378 aa4.34□□□□□ -1.71
SNORA40.14-201ENST00000516543 N4BP3O15049 544 aa4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 NME1P15531 152 aaKnown RBP4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 MCM4P33991 863 aa4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 NCKAP1LP55160 1127 aa4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 YBX1P67809 324 aaKnown RBP4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 CRTC3Q6UUV7 619 aa4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 FCRL2Q96LA5 508 aaPredicted RBP4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 SLC9A7Q96T83 725 aa4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 MKRN2Q9H000 416 aaKnown RBP4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 XYLT2Q9H1B5 865 aa4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 AP5S1Q9NUS5 200 aa4.33□□□□□ -1.72
SNORA40.14-201ENST00000516543 OTOL1A6NHN0 477 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 NUDT19A8MXV4 375 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 C9IYK1 514 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 RFXAPO00287 272 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 IRS4O14654 1257 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 SHOXO15266 292 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 FOXD2O60548 495 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 PDIA4P13667 645 aaKnown RBP4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 PRKCAP17252 672 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 AFF3P51826 1226 aaKnown RBP4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 ERVFRD-1P60508 538 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 APOBRQ0VD83 1088 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 SLCO6A1Q86UG4 719 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 IGDCC3Q8IVU1 814 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 SYT8Q8NBV8 401 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 FEZF2Q8TBJ5 459 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 EAF1Q96JC9 268 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 JMJD8Q96S16 334 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 CDADC1Q9BWV3 514 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 GZF1Q9H116 711 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 TNFRSF10DQ9UBN6 386 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 FBXL21Q9UKT6 434 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 PLA2G2DQ9UNK4 145 aa4.32□□□□□ -1.72
SNORA40.14-201ENST00000516543 HRKO00198 91 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 TNFRSF10CO14798 259 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 ZNF205O95201 554 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 MSL3P1P0C860 447 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 ACRP10323 421 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 VAV1P15498 845 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 AUHQ13825 339 aaKnown RBP4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 MRPL58Q14197 206 aaKnown RBP4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 RAB3GAP1Q15042 981 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 CCDC27Q2M243 656 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 RTP2Q5QGT7 225 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 LDLRAD1Q5T700 205 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 TDRD10Q5VZ19 366 aaKnown RBP4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 TMC6Q7Z403 805 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 LDHDQ86WU2 507 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 FAM129CQ86XR2 697 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 ZDHHC14Q8IZN3 488 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 NUP43Q8NFH3 380 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 MZB1Q8WU39 189 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 IMPACTQ9P2X3 320 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 PCDHB12Q9Y5F1 795 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 TAF6LQ9Y6J9 622 aa4.31□□□□□ -1.72
SNORA40.14-201ENST00000516543 MEIS3P2A8K0S8 358 aa4.3□□□□□ -1.72
SNORA40.14-201ENST00000516543 MPOP05164 745 aa4.3□□□□□ -1.72
SNORA40.14-201ENST00000516543 BMP8BP34820 402 aa4.3□□□□□ -1.72
SNORA40.14-201ENST00000516543 KRTAP10-2P60368 255 aa4.3□□□□□ -1.72
SNORA40.14-201ENST00000516543 CYP4F8P98187 520 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms