RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 SYTL4Q96C24 671 aaPredicted RBP6.43□□□□□ -1.38
NEK1-204ENST00000509912 KCNQ5Q9NR82 932 aa6.43□□□□□ -1.38
NEK1-204ENST00000509912 MARK1Q9P0L2 795 aa6.43□□□□□ -1.38
NEK1-204ENST00000509912 CCNL1Q9UK58 526 aaPredicted RBP6.43□□□□□ -1.38
NEK1-204ENST00000509912 PPM1HQ9ULR3 514 aa6.43□□□□□ -1.38
NEK1-204ENST00000509912 PTCH2Q9Y6C5 1203 aa6.43□□□□□ -1.38
NEK1-204ENST00000509912 SSRP1Q08945 709 aaKnown RBP6.43□□□□□ -1.38
NEK1-204ENST00000509912 HYAL2Q12891 473 aa6.43□□□□□ -1.38
NEK1-204ENST00000509912 AXDND1Q5T1B0 1012 aaPredicted RBP6.43□□□□□ -1.38
NEK1-204ENST00000509912 SULF2Q8IWU5 870 aa6.43□□□□□ -1.38
NEK1-204ENST00000509912 TSR2Q969E8 191 aaKnown RBP6.43□□□□□ -1.38
NEK1-204ENST00000509912 NUCKS1Q9H1E3 243 aaKnown RBP6.43□□□□□ -1.38
NEK1-204ENST00000509912 SRCAPQ6ZRS2 3230 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 LOC102724428A0A0B4J2F2 783 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 CDC14CA4D256 554 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 SIK1P57059 783 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 FSTL1Q12841 308 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 CLEC4GQ6UXB4 293 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 SV2BQ7L1I2 683 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 FAM35AQ86V20 835 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 NUDT8Q8WV74 236 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 PMEPA1Q969W9 287 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 KLHL3Q9UH77 587 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 PPME1Q9Y570 386 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 ENPP3O14638 875 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 KIF4AO95239 1232 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 EPHA1P21709 976 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 TM4SF1P30408 202 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 L1CAMP32004 1257 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 GIPRP48546 466 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 IFRD2Q12894 506 aaPredicted RBP6.42□□□□□ -1.38
NEK1-204ENST00000509912 VN1R5Q7Z5H4 357 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 TTC6Q86TZ1 520 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 CERS3Q8IU89 383 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 MSRB2Q9Y3D2 182 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 PCDHGC4Q9Y5F7 938 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 AFDNP55196 1824 aaKnown RBP6.42□□□□□ -1.38
NEK1-204ENST00000509912 CYP27B1O15528 508 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 MAP4K4O95819 1239 aaPredicted RBP6.42□□□□□ -1.38
NEK1-204ENST00000509912 BPNT1O95861 308 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 CDKN1CP49918 316 aaPredicted RBP6.42□□□□□ -1.38
NEK1-204ENST00000509912 DALRD3Q5D0E6 543 aaKnown RBP6.42□□□□□ -1.38
NEK1-204ENST00000509912 NLGN2Q8NFZ4 835 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 ZNF526Q8TF50 670 aaPredicted RBP6.42□□□□□ -1.38
NEK1-204ENST00000509912 JDP2Q8WYK2 163 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 APPBP2Q92624 585 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 IER2Q9BTL4 223 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 PBX4Q9BYU1 374 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 UBE2OQ9C0C9 1292 aaKnown RBP6.42□□□□□ -1.38
NEK1-204ENST00000509912 DNAJB12Q9NXW2 375 aaKnown RBP6.42□□□□□ -1.38
NEK1-204ENST00000509912 PLA2G2EQ9NZK7 142 aa6.42□□□□□ -1.38
NEK1-204ENST00000509912 KIF7Q2M1P5 1343 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 SBF1O95248 1867 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 HOXB7P09629 217 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 ZEB1P37275 1124 aaPredicted RBP6.41□□□□□ -1.38
NEK1-204ENST00000509912 SCARF1Q14162 830 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 EIF4A2Q14240 407 aaKnown RBP6.41□□□□□ -1.38
NEK1-204ENST00000509912 CLEC4MQ9H2X3 399 aaPredicted RBP6.41□□□□□ -1.38
NEK1-204ENST00000509912 SNED1Q8TER0 1413 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 CNGA1P29973 690 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 PDE6BP35913 854 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 PLEKHG6Q3KR16 790 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 PLEKHG4Q58EX7 1191 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 WDR89Q96FK6 387 aaPredicted RBP6.41□□□□□ -1.38
NEK1-204ENST00000509912 DPH2Q9BQC3 489 aaPredicted RBP6.41□□□□□ -1.38
NEK1-204ENST00000509912 IRF2BPLQ9H1B7 796 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 DDX56Q9NY93 547 aaKnown RBP6.41□□□□□ -1.38
NEK1-204ENST00000509912 ZNRF3Q9ULT6 936 aa6.41□□□□□ -1.38
NEK1-204ENST00000509912 CLSTN1O94985 981 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 KCNQ4P56696 695 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 PCDH1Q08174 1060 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 FOXB2Q5VYV0 432 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 SYT9Q86SS6 491 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 NLRP8Q86W28 1048 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 COL23A1Q86Y22 540 aaPredicted RBP6.4□□□□□ -1.38
NEK1-204ENST00000509912 PKNOX2Q96KN3 472 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 CEP44Q9C0F1 390 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 CHPF2Q9P2E5 772 aa6.4□□□□□ -1.38
NEK1-204ENST00000509912 CILPO75339 1184 aa6.4□□□□□ -1.39
NEK1-204ENST00000509912 FAM157BP0CG42 384 aa6.4□□□□□ -1.39
NEK1-204ENST00000509912 ACRP10323 421 aa6.4□□□□□ -1.39
NEK1-204ENST00000509912 MASP1P48740 699 aa6.4□□□□□ -1.39
NEK1-204ENST00000509912 TDRD10Q5VZ19 366 aaKnown RBP6.4□□□□□ -1.39
NEK1-204ENST00000509912 SMG9Q9H0W8 520 aaKnown RBP6.4□□□□□ -1.39
NEK1-204ENST00000509912 YBX3P16989 372 aaKnown RBP eCLIP6.39□□□□□ -1.39
NEK1-204ENST00000509912 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
NEK1-204ENST00000509912 LLGL2Q6P1M3 1020 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 BHLHE41Q9C0J9 482 aaPredicted RBP6.39□□□□□ -1.39
NEK1-204ENST00000509912 ATG3Q9NT62 314 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 PRR12Q9ULL5 1215 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 GPC6Q9Y625 555 aaPredicted RBP6.39□□□□□ -1.39
NEK1-204ENST00000509912 PRAMEF27A3QJZ7 478 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 CAPN2P17655 700 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 WDR44Q5JSH3 913 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 PERM1Q5SV97 790 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 MSL1Q68DK7 614 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 STYK1Q6J9G0 422 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 USHBP1Q8N6Y0 703 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 PLPPR2Q96GM1 343 aa6.39□□□□□ -1.39
NEK1-204ENST00000509912 CACNA1FO60840 1977 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms