RNA–Protein interactions for RNA: ENST00000509354.1

TRIO-213, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 801 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-213ENST00000509354 RABEP1Q15276 862 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 ABCB5Q2M3G0 1257 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 CERKLQ49MI3 558 aaPredicted RBP8.64□□□□□ -1.03
TRIO-213ENST00000509354 SLC9C1Q4G0N8 1177 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 ZSCAN25Q6NSZ9 544 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 ANKRD13CQ8N6S4 541 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 APPBP2Q92624 585 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 ARMC5Q96C12 935 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 SEC62Q99442 399 aaKnown RBP8.64□□□□□ -1.03
TRIO-213ENST00000509354 FEZ1Q99689 392 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 GABRQQ9UN88 632 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 SLC4A4Q9Y6R1 1079 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 ALPK3Q96L96 1907 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 PLXNA1Q9UIW2 1896 aa8.64□□□□□ -1.03
TRIO-213ENST00000509354 MYPNQ86TC9 1320 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 USP17L10C9JJH3 530 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 USP17L12C9JPN9 530 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 USP17L21D6R901 530 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 MPHOSPH10O00566 681 aaKnown RBP8.63□□□□□ -1.03
TRIO-213ENST00000509354 RNF113AO15541 343 aaKnown RBP8.63□□□□□ -1.03
TRIO-213ENST00000509354 GPAA1O43292 621 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 KDM4AO75164 1064 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 FMNL1O95466 1100 aaPredicted RBP8.63□□□□□ -1.03
TRIO-213ENST00000509354 AKR1B1P15121 316 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 GCGRP47871 477 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 MLLT1Q03111 559 aaPredicted RBP8.63□□□□□ -1.03
TRIO-213ENST00000509354 PRKCZQ05513 592 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 BECN1Q14457 450 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 NECTIN1Q15223 517 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 STK11IPQ8N1F8 1099 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 RUFY2Q8WXA3 655 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 MAP4K1Q92918 833 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 RILPL2Q969X0 211 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 KCTD12Q96CX2 325 aaKnown RBP8.63□□□□□ -1.03
TRIO-213ENST00000509354 ZNF333Q96JL9 665 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 STRBPQ96SI9 672 aaKnown RBP8.63□□□□□ -1.03
TRIO-213ENST00000509354 FSD1Q9BTV5 496 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 ATP8A2Q9NTI2 1148 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 TMOD4Q9NZQ9 345 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 SRRDQ9UH36 339 aa8.63□□□□□ -1.03
TRIO-213ENST00000509354 A0A1W2PRG0 241 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 GSG1L2A8MUP6 293 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 VCAM1P19320 739 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 HERVK_113P62684 666 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 IRX3P78415 501 aaPredicted RBP8.62□□□□□ -1.03
TRIO-213ENST00000509354 FAM110CQ1W6H9 321 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 KIAA1755Q5JYT7 1200 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 C12orf60Q5U649 245 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 CTR9Q6PD62 1173 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 THSD4Q6ZMP0 1018 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 CCDC129Q6ZRS4 1044 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 C16orf86Q6ZW13 317 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 TM6SF1Q9BZW5 370 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 TXNRD2Q9NNW7 524 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
TRIO-213ENST00000509354 ROBO3Q96MS0 1386 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 ZNF236Q9UL36 1845 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 CCDC171Q6TFL3 1326 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 MCM3APO60318 1980 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 A0A0D9SFI3 127 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 C19orf81C9J6K1 198 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 TNPO2O14787 897 aaKnown RBP8.61□□□□□ -1.03
TRIO-213ENST00000509354 FOXP2O15409 715 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 ZFYP08048 801 aaPredicted RBP8.61□□□□□ -1.03
TRIO-213ENST00000509354 ELNP15502 786 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 CDK8P49336 464 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 FCGRTP55899 365 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 NMIQ13287 307 aaPredicted RBP8.61□□□□□ -1.03
TRIO-213ENST00000509354 PABPC4Q13310 644 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRIO-213ENST00000509354 ARHGEF6Q15052 776 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 MTFR1Q15390 333 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 ZMYM1Q5SVZ6 1142 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 RAET1EQ8TD07 263 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 C12orf42Q96LP6 360 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 P2RX7Q99572 595 aaKnown RBP8.61□□□□□ -1.03
TRIO-213ENST00000509354 PAGR1Q9BTK6 254 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 KIAA1683Q9H0B3 1180 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 ALDH8A1Q9H2A2 487 aaPredicted RBP8.61□□□□□ -1.03
TRIO-213ENST00000509354 CABP5Q9NP86 173 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 HELLSQ9NRZ9 838 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 SWAP70Q9UH65 585 aa8.61□□□□□ -1.03
TRIO-213ENST00000509354 SMCHD1A6NHR9 2005 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 CD2BP2O95400 341 aaKnown RBP8.6□□□□□ -1.03
TRIO-213ENST00000509354 GNRH1P01148 92 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 EN2P19622 333 aaPredicted RBP8.6□□□□□ -1.03
TRIO-213ENST00000509354 HOXA7P31268 230 aaPredicted RBP8.6□□□□□ -1.03
TRIO-213ENST00000509354 GCLCP48506 637 aaPredicted RBP8.6□□□□□ -1.03
TRIO-213ENST00000509354 TDO2P48775 406 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 CLK2P49760 499 aaKnown RBP8.6□□□□□ -1.03
TRIO-213ENST00000509354 FLT3LGP49771 235 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 ICA1Q05084 483 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 TMEM179Q6ZVK1 233 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 AMOTL1Q8IY63 956 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 FAM227BQ96M60 508 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 PORCNQ9H237 461 aa8.6□□□□□ -1.03
TRIO-213ENST00000509354 RPAP3Q9H6T3 665 aaPredicted RBP8.6□□□□□ -1.03
TRIO-213ENST00000509354 DIAPH3Q9NSV4 1193 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms