RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 PDHBP11177 359 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 TRAPPC10P48553 1259 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 RBM5P52756 815 aaKnown RBP eCLIP28.2■■■□□ 2.12e-7■□□□□ 11
DHFR-203ENST00000505337 CACNB3P54284 484 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 USP17L2Q6R6M4 530 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 CCDC148Q8NFR7 591 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 TRPM4Q8TD43 1214 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 RRAGDQ9NQL2 400 aaPredicted RBP28.2■■■□□ 2.1
DHFR-203ENST00000505337 ANO10Q9NW15 660 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 BARHL2Q9NY43 387 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 PCDHA4Q9UN74 947 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 ATRNL1Q5VV63 1379 aa28.2■■■□□ 2.1
DHFR-203ENST00000505337 ESPNB1AK53 854 aa28.19■■■□□ 2.1
DHFR-203ENST00000505337 STXBP3O00186 592 aa28.19■■■□□ 2.1
DHFR-203ENST00000505337 HTRA3P83110 453 aa28.19■■■□□ 2.1
DHFR-203ENST00000505337 BLIDQ8IZY5 108 aa28.19■■■□□ 2.1
DHFR-203ENST00000505337 H7C1D1 291 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 ATP2B1P20020 1258 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 TTC38Q5R3I4 469 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 SH3BP5LQ7L8J4 393 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 ERCC4Q92889 916 aaPredicted RBP28.18■■■□□ 2.1
DHFR-203ENST00000505337 GMLQ99445 158 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 KCNH3Q9ULD8 1083 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 PASKQ96RG2 1323 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 DDTLA6NHG4 134 aaPredicted RBP28.18■■■□□ 2.1
DHFR-203ENST00000505337 TTLL1O95922 423 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 IQCB1Q15051 598 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 GALNT17Q6IS24 598 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 CLEC10AQ8IUN9 316 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 AGBL3Q8NEM8 1001 aa28.18■■■□□ 2.1
DHFR-203ENST00000505337 USP17L5A8MUK1 530 aa28.17■■■□□ 2.1
DHFR-203ENST00000505337 EGFRP00533 1210 aa28.17■■■□□ 2.1
DHFR-203ENST00000505337 ASPRV1Q53RT3 343 aa28.17■■■□□ 2.1
DHFR-203ENST00000505337 PIK3AP1Q6ZUJ8 805 aa28.17■■■□□ 2.1
DHFR-203ENST00000505337 SAMD7Q7Z3H4 446 aa28.17■■■□□ 2.1
DHFR-203ENST00000505337 LRRC47Q8N1G4 583 aaKnown RBP28.17■■■□□ 2.1
DHFR-203ENST00000505337 CCDC17Q96LX7 622 aa28.17■■■□□ 2.1
DHFR-203ENST00000505337 TCP10Q12799 353 aa28.16■■■□□ 2.1
DHFR-203ENST00000505337 CFAP100Q494V2 611 aa28.16■■■□□ 2.1
DHFR-203ENST00000505337 HEATR3Q7Z4Q2 680 aa28.16■■■□□ 2.1
DHFR-203ENST00000505337 CPVLQ9H3G5 476 aa28.16■■■□□ 2.1
DHFR-203ENST00000505337 PI4KBQ9UBF8 816 aa28.16■■■□□ 2.1
DHFR-203ENST00000505337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.15■■■□□ 2.1
DHFR-203ENST00000505337 ELOA2Q8IYF1 753 aaPredicted RBP28.15■■■□□ 2.1
DHFR-203ENST00000505337 RIOX1Q9H6W3 641 aa28.15■■■□□ 2.1
DHFR-203ENST00000505337 FAM13BQ9NYF5 915 aa28.15■■■□□ 2.1
DHFR-203ENST00000505337 CCDC39Q9UFE4 941 aa28.15■■■□□ 2.1
DHFR-203ENST00000505337 ATP2C1P98194 919 aaPredicted RBP28.15■■■□□ 2.1
DHFR-203ENST00000505337 KRBA2Q6ZNG9 492 aa28.15■■■□□ 2.1
DHFR-203ENST00000505337 FERMT2Q96AC1 680 aa28.15■■■□□ 2.1
DHFR-203ENST00000505337 PGAP2Q9UHJ9 254 aa28.15■■■□□ 2.1
DHFR-203ENST00000505337 TUBE1Q9UJT0 475 aa28.15■■■□□ 2.1
DHFR-203ENST00000505337 A0A087WWV3 80 aa28.14■■■□□ 2.1
DHFR-203ENST00000505337 ENTPD3O75355 529 aa28.14■■■□□ 2.1
DHFR-203ENST00000505337 SLURP2P0DP57 97 aa28.14■■■□□ 2.1
DHFR-203ENST00000505337 SPECC1Q5M775 1068 aa28.14■■■□□ 2.1
DHFR-203ENST00000505337 METTL16Q86W50 562 aaKnown RBP28.14■■■□□ 2.1
DHFR-203ENST00000505337 CEP57L1Q8IYX8 460 aa28.14■■■□□ 2.1
DHFR-203ENST00000505337 RRP36Q96EU6 259 aaKnown RBP28.14■■■□□ 2.1
DHFR-203ENST00000505337 CSRNP2Q9H175 543 aa28.14■■■□□ 2.1
DHFR-203ENST00000505337 TDRD3Q9H7E2 651 aaKnown RBP28.14■■■□□ 2.1
DHFR-203ENST00000505337 TBC1D10BQ4KMP7 808 aaPredicted RBP28.13■■■□□ 2.09
DHFR-203ENST00000505337 PPP4R3BQ5MIZ7 849 aa28.13■■■□□ 2.09
DHFR-203ENST00000505337 ZSCAN30Q86W11 494 aa28.13■■■□□ 2.09
DHFR-203ENST00000505337 ZMYND12Q9H0C1 365 aa28.13■■■□□ 2.09
DHFR-203ENST00000505337 RTN4Q9NQC3 1192 aaKnown RBP28.13■■■□□ 2.09
DHFR-203ENST00000505337 CLIP2Q9UDT6 1046 aa28.13■■■□□ 2.09
DHFR-203ENST00000505337 ZNF280AP59817 542 aaPredicted RBP28.12■■■□□ 2.09
DHFR-203ENST00000505337 LONRF3Q496Y0 759 aa28.12■■■□□ 2.09
DHFR-203ENST00000505337 TATDN1Q6P1N9 297 aa28.12■■■□□ 2.09
DHFR-203ENST00000505337 ZNF174Q15697 407 aa28.12■■■□□ 2.09
DHFR-203ENST00000505337 DNAJC5GQ8N7S2 189 aa28.12■■■□□ 2.09
DHFR-203ENST00000505337 CCDC12Q8WUD4 166 aaPredicted RBP28.12■■■□□ 2.09
DHFR-203ENST00000505337 PRMT6Q96LA8 375 aaPredicted RBP28.12■■■□□ 2.09
DHFR-203ENST00000505337 PCDHA6Q9UN73 950 aa28.12■■■□□ 2.09
DHFR-203ENST00000505337 PCDHA8Q9Y5H6 950 aa28.12■■■□□ 2.09
DHFR-203ENST00000505337 FRMPD2Q68DX3 1309 aaPredicted RBP28.12■■■□□ 2.09
DHFR-203ENST00000505337 hCG_1984214I3L0E3 225 aa28.11■■■□□ 2.09
DHFR-203ENST00000505337 ZNF543Q08ER8 600 aa28.11■■■□□ 2.09
DHFR-203ENST00000505337 DPCR1Q3MIW9 517 aa28.11■■■□□ 2.09
DHFR-203ENST00000505337 RBM26Q5T8P6 1007 aaKnown RBP28.11■■■□□ 2.09
DHFR-203ENST00000505337 ZNF713Q8N859 430 aaPredicted RBP28.11■■■□□ 2.09
DHFR-203ENST00000505337 ZC3H15Q8WU90 426 aaKnown RBP28.11■■■□□ 2.09
DHFR-203ENST00000505337 SEC63Q9UGP8 760 aaKnown RBP28.11■■■□□ 2.09
DHFR-203ENST00000505337 FAM196BA6NMK8 535 aa28.1■■■□□ 2.09
DHFR-203ENST00000505337 NLRP12P59046 1061 aa28.1■■■□□ 2.09
DHFR-203ENST00000505337 PTGDRQ13258 359 aa28.1■■■□□ 2.09
DHFR-203ENST00000505337 DHX40Q8IX18 779 aaKnown RBP28.1■■■□□ 2.09
DHFR-203ENST00000505337 CNNM3Q8NE01 707 aa28.1■■■□□ 2.09
DHFR-203ENST00000505337 RASGRP4Q8TDF6 673 aa28.1■■■□□ 2.09
DHFR-203ENST00000505337 PIGSQ96S52 555 aa28.1■■■□□ 2.09
DHFR-203ENST00000505337 BPIFA3Q9BQP9 254 aa28.1■■■□□ 2.09
DHFR-203ENST00000505337 ESYT2A0FGR8 921 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 SPDYE2BA6NHP3 402 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 MPHOSPH10O00566 681 aaKnown RBP28.09■■■□□ 2.09
DHFR-203ENST00000505337 SPDYE6P0CI01 402 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 NAPAP54920 295 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 HOMER1Q86YM7 354 aa28.09■■■□□ 2.09
DHFR-203ENST00000505337 FOXP4Q8IVH2 680 aaPredicted RBP28.09■■■□□ 2.09
DHFR-203ENST00000505337 ZSCAN29Q8IWY8 852 aaPredicted RBP28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms