RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 GJC2Q5T442 439 aaPredicted RBP23.73■■□□□ 1.39
UBE2D3-220ENST00000505307 OAZ1P54368 228 aa23.72■■□□□ 1.39
UBE2D3-220ENST00000505307 TFAP4Q01664 338 aa23.72■■□□□ 1.39
UBE2D3-220ENST00000505307 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.72■■□□□ 1.39
UBE2D3-220ENST00000505307 DDX11Q96FC9 970 aa23.72■■□□□ 1.39
UBE2D3-220ENST00000505307 PRKAG2Q9UGJ0 569 aa23.72■■□□□ 1.39
UBE2D3-220ENST00000505307 RARBP10826 455 aa23.71■■□□□ 1.39
UBE2D3-220ENST00000505307 ATN1P54259 1190 aaPredicted RBP23.71■■□□□ 1.39
UBE2D3-220ENST00000505307 ANO1Q5XXA6 986 aa23.71■■□□□ 1.39
UBE2D3-220ENST00000505307 SLFN13Q68D06 897 aa23.71■■□□□ 1.39
UBE2D3-220ENST00000505307 LBHD1Q9BQE6 289 aaPredicted RBP23.71■■□□□ 1.39
UBE2D3-220ENST00000505307 SLC38A10Q9HBR0 1119 aa23.71■■□□□ 1.39
UBE2D3-220ENST00000505307 FBXO40Q9UH90 709 aa23.71■■□□□ 1.39
UBE2D3-220ENST00000505307 CNPY2Q9Y2B0 182 aa23.71■■□□□ 1.39
UBE2D3-220ENST00000505307 SOX1O00570 391 aaPredicted RBP23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 BMP3P12645 472 aa23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 PDE1AP54750 535 aa23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 RTP1P59025 263 aa23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 LRRC41Q15345 812 aa23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 SLC39A5Q6ZMH5 540 aa23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 LRRC47Q8N1G4 583 aaKnown RBP23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 KIFC2Q96AC6 838 aa23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 HELLSQ9NRZ9 838 aa23.7■■□□□ 1.38
UBE2D3-220ENST00000505307 MYH4Q9Y623 1939 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 SYNGAP1Q96PV0 1343 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 FAM47AQ5JRC9 791 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 MAMDC4Q6UXC1 1216 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 ZNF467Q7Z7K2 595 aaPredicted RBP23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 CPXCR1Q8N123 301 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 CHST13Q8NET6 341 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 CHURC1Q8WUH1 139 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 LRCH3Q96II8 777 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 GMCL1Q96IK5 515 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 XPNPEP3Q9NQH7 507 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 ANAPC4Q9UJX5 808 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 RIPK3Q9Y572 518 aa23.69■■□□□ 1.38
UBE2D3-220ENST00000505307 DNAJC25-GNG10A0A024R161 153 aa23.68■■□□□ 1.38
UBE2D3-220ENST00000505307 MYCNP04198 464 aaPredicted RBP23.68■■□□□ 1.38
UBE2D3-220ENST00000505307 AKR1A1P14550 325 aa23.68■■□□□ 1.38
UBE2D3-220ENST00000505307 SNX17Q15036 470 aa23.68■■□□□ 1.38
UBE2D3-220ENST00000505307 ALX1Q15699 326 aa23.68■■□□□ 1.38
UBE2D3-220ENST00000505307 C1orf53Q5VUE5 145 aa23.68■■□□□ 1.38
UBE2D3-220ENST00000505307 RNF180Q86T96 592 aa23.68■■□□□ 1.38
UBE2D3-220ENST00000505307 FAM160B2Q86V87 743 aa23.68■■□□□ 1.38
UBE2D3-220ENST00000505307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.68■■□□□ 1.381e-8■□□□□ 9.1
UBE2D3-220ENST00000505307 LAMA3Q16787 3333 aa23.67■■□□□ 1.38
UBE2D3-220ENST00000505307 TSPY2A6NKD2 308 aa23.67■■□□□ 1.38
UBE2D3-220ENST00000505307 PLA2G6O60733 806 aa23.67■■□□□ 1.38
UBE2D3-220ENST00000505307 ZNF865P0CJ78 1059 aaPredicted RBP23.67■■□□□ 1.38
UBE2D3-220ENST00000505307 STAT2P52630 851 aa23.67■■□□□ 1.38
UBE2D3-220ENST00000505307 MDM2Q00987 491 aaPredicted RBP23.67■■□□□ 1.38
UBE2D3-220ENST00000505307 RAVER2Q9HCJ3 691 aaKnown RBP23.67■■□□□ 1.38
UBE2D3-220ENST00000505307 ATP11BQ9Y2G3 1177 aa23.67■■□□□ 1.38
UBE2D3-220ENST00000505307 FOXP2O15409 715 aa23.66■■□□□ 1.38
UBE2D3-220ENST00000505307 ADCYAP1R1P41586 468 aa23.66■■□□□ 1.38
UBE2D3-220ENST00000505307 SLC1A4P43007 532 aa23.66■■□□□ 1.38
UBE2D3-220ENST00000505307 CCDC129Q6ZRS4 1044 aa23.66■■□□□ 1.38
UBE2D3-220ENST00000505307 ANKRD35Q8N283 1001 aa23.66■■□□□ 1.38
UBE2D3-220ENST00000505307 STAG1Q8WVM7 1258 aa23.66■■□□□ 1.38
UBE2D3-220ENST00000505307 PHF24Q9UPV7 400 aa23.66■■□□□ 1.38
UBE2D3-220ENST00000505307 PLXNA1Q9UIW2 1896 aa23.66■■□□□ 1.38
UBE2D3-220ENST00000505307 TMEM232C9JQI7 657 aa23.65■■□□□ 1.38
UBE2D3-220ENST00000505307 SLC4A3P48751 1232 aa23.65■■□□□ 1.38
UBE2D3-220ENST00000505307 MCMDC2Q4G0Z9 681 aa23.65■■□□□ 1.38
UBE2D3-220ENST00000505307 RWDD1Q9H446 243 aaPredicted RBP23.65■■□□□ 1.38
UBE2D3-220ENST00000505307 FAM184BQ9ULE4 1060 aa23.65■■□□□ 1.38
UBE2D3-220ENST00000505307 STX8Q9UNK0 236 aa23.65■■□□□ 1.38
UBE2D3-220ENST00000505307 ORC4O43929 436 aa23.64■■□□□ 1.37
UBE2D3-220ENST00000505307 FGRP09769 529 aa23.64■■□□□ 1.37
UBE2D3-220ENST00000505307 TAL1P17542 331 aaPredicted RBP23.64■■□□□ 1.37
UBE2D3-220ENST00000505307 CTDSPL2Q05D32 466 aa23.64■■□□□ 1.37
UBE2D3-220ENST00000505307 TKFCQ3LXA3 575 aa23.64■■□□□ 1.37
UBE2D3-220ENST00000505307 TSEN34Q9BSV6 310 aaKnown RBP23.64■■□□□ 1.37
UBE2D3-220ENST00000505307 ISY1Q9ULR0 285 aaKnown RBP23.64■■□□□ 1.37
UBE2D3-220ENST00000505307 SMCHD1A6NHR9 2005 aa23.64■■□□□ 1.37
UBE2D3-220ENST00000505307 SNAI1O95863 264 aaPredicted RBP23.63■■□□□ 1.37
UBE2D3-220ENST00000505307 IKQ13123 557 aaPredicted RBP23.63■■□□□ 1.37
UBE2D3-220ENST00000505307 VPS53Q5VIR6 699 aa23.63■■□□□ 1.37
UBE2D3-220ENST00000505307 RCSD1Q6JBY9 416 aa23.63■■□□□ 1.37
UBE2D3-220ENST00000505307 DNAH12Q6ZR08 3092 aa23.63■■□□□ 1.37
UBE2D3-220ENST00000505307 RANBP6O60518 1105 aaKnown RBP23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 PGK1P00558 417 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 MCCP23508 829 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 NOVP48745 357 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 TRIM60Q495X7 471 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 SMC5Q8IY18 1101 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 FERMT2Q96AC1 680 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 ABHD16BQ9H3Z7 469 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 ACAD9Q9H845 621 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 IL17RBQ9NRM6 502 aa23.62■■□□□ 1.37
UBE2D3-220ENST00000505307 ZMYM6O95789 1325 aa23.61■■□□□ 1.37
UBE2D3-220ENST00000505307 DUSP11O75319 330 aaKnown RBP23.61■■□□□ 1.37
UBE2D3-220ENST00000505307 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.61■■□□□ 1.37
UBE2D3-220ENST00000505307 ADAMTS4O75173 837 aa23.6■■□□□ 1.37
UBE2D3-220ENST00000505307 FGAP02671 866 aa23.6■■□□□ 1.37
UBE2D3-220ENST00000505307 MFAP1P55081 439 aaKnown RBP23.6■■□□□ 1.37
UBE2D3-220ENST00000505307 ACVR2BQ13705 512 aa23.6■■□□□ 1.37
UBE2D3-220ENST00000505307 NUP133Q8WUM0 1156 aa23.6■■□□□ 1.37
UBE2D3-220ENST00000505307 FAM227BQ96M60 508 aa23.6■■□□□ 1.37
UBE2D3-220ENST00000505307 LNPKQ9C0E8 428 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms