RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 SYNGAP1Q96PV0 1343 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 SMIM22K7EJ46 135 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 ATP2A1O14983 1001 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 GPAA1O43292 621 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 NDUFB10O96000 172 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 TLE2Q04725 743 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 PDE4BQ07343 736 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 ZNF467Q7Z7K2 595 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 REPS2Q8NFH8 660 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 BADQ92934 168 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 MKL1Q969V6 931 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 ZBTB47Q9UFB7 747 aaPredicted RBP13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 RLFQ13129 1914 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 A0A0G2JMZ2 1700 aa13.25□□□□□ -0.29
UBE2D3-219ENST00000505207 ROBO3Q96MS0 1386 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 LAMA3Q16787 3333 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 BAZ2AQ9UIF9 1905 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 MOXD2PA6NHM9 499 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 DCDC2CA8MYV0 355 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 TTLL1O95922 423 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 PGK1P00558 417 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 CHGBP05060 677 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 CLTBP09497 229 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 RAG1P15918 1043 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 SLC4A3P48751 1232 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 OAZ1P54368 228 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 SMAD3P84022 425 aaKnown RBP13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 SHHQ15465 462 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 MAMDC4Q6UXC1 1216 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 ANKRD35Q8N283 1001 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 CHST13Q8NET6 341 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 OSBP2Q969R2 916 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 PDLIM7Q9NR12 457 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 TMEM39AQ9NV64 488 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 FRMPD3Q5JV73 1810 aa13.24□□□□□ -0.29
UBE2D3-219ENST00000505207 TTC41PQ6P2S7 1318 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 DUSP11O75319 330 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 ZNF865P0CJ78 1059 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 TSPY3P0CV98 308 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 TSPY8P0CW00 308 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 CCDC174Q6PII3 467 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 PCSK9Q8NBP7 692 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 GMCL1P1Q8NEA9 526 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 CHURC1Q8WUH1 139 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 TOX2Q96NM4 488 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 NUP88Q99567 741 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 ABHD16BQ9H3Z7 469 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 STARD7Q9NQZ5 370 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 ZHX1Q9UKY1 873 aaPredicted RBP13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 ISY1Q9ULR0 285 aaKnown RBP13.23□□□□□ -0.29
UBE2D3-219ENST00000505207 MROH7Q68CQ1 1323 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 A0A1W2PQ45 241 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 A0A1W2PQY0 241 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 TRIM43BA6NCK2 446 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 KIAA0355O15063 1070 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 PQBP1O60828 265 aaKnown RBP13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 TAL1P17542 331 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 ACLYP53396 1101 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 C20orf194Q5TEA3 1177 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 IFNL3Q8IZI9 196 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 NEDD1Q8NHV4 660 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 TRIM43Q96BQ3 446 aaPredicted RBP13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 GLT1D1Q96MS3 346 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 NAPBQ9H115 298 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 SLC38A10Q9HBR0 1119 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 DNAH12Q6ZR08 3092 aa13.22□□□□□ -0.29
UBE2D3-219ENST00000505207 ZNFX1Q9P2E3 1918 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 ELP1O95163 1332 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 DNAJC25-GNG10A0A024R161 153 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 IGKV6D-41A0A0C4DH26 115 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 ADAMTS4O75173 837 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 BMP3P12645 472 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 FPGSQ05932 587 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 IKQ13123 557 aaPredicted RBP13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 ACVR2BQ13705 512 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 KCNA10Q16322 511 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 SLFN13Q68D06 897 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 FAM160B2Q86V87 743 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 VTI1AQ96AJ9 217 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 CEP95Q96GE4 821 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 RNPC3Q96LT9 517 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 FAM161BQ96MY7 647 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 FSD1Q9BTV5 496 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 RAVER2Q9HCJ3 691 aaKnown RBP13.21□□□□□ -0.29
UBE2D3-219ENST00000505207 MYH7P12883 1935 aa13.21□□□□□ -0.3
UBE2D3-219ENST00000505207 TMEM265A0A087WTH1 108 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 PRDM1O75626 825 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 SNAI1O95863 264 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 C6orf222P0C671 652 aaPredicted RBP13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 STAT2P52630 851 aa13.2□□□□□ -0.3
UBE2D3-219ENST00000505207 TFAP4Q01664 338 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms