RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TCP11X2Q5H9J9 407 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC70Q6NSX1 233 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 SDR42E1Q8WUS8 393 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC114Q96M63 670 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 ZIM3Q96PE6 472 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 CTAGE1Q96RT6 745 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 NAA15Q9BXJ9 866 aaKnown RBP8.52□□□□□ -1.05
NEDD9-208ENST00000504387 GREM2Q9H772 168 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 ASAP1Q9ULH1 1129 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 NCAPD2Q15021 1401 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 ERICH2A1L162 156 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 OPLAHO14841 1288 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 KRT86O43790 486 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 CARSP49589 748 aaKnown RBP8.52□□□□□ -1.05
NEDD9-208ENST00000504387 GUCY2DQ02846 1103 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 HLFQ16534 295 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 WDR93Q6P2C0 686 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 MFSD6Q6ZSS7 791 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 KSR1Q8IVT5 923 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 KLHL7Q8IXQ5 586 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 CABS1Q96KC9 395 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 KANSL2Q9H9L4 492 aa8.52□□□□□ -1.05
NEDD9-208ENST00000504387 SRPRBQ9Y5M8 271 aaKnown RBP8.52□□□□□ -1.05
NEDD9-208ENST00000504387 ZC3H4Q9UPT8 1303 aaKnown RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 UPP2O95045 317 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 MYBL1P10243 752 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 TMOD1P28289 359 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 ERCC5P28715 1186 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 PEX19P40855 299 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 TBC1D8BQ0IIM8 1120 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 RILPL1Q5EBL4 403 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 C2CD5Q86YS7 1000 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 PRPF38AQ8NAV1 312 aaKnown RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 ZNF526Q8TF50 670 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 GOLPH3Q9H4A6 298 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 NHEJ1Q9H9Q4 299 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 EPB41L5Q9HCM4 733 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 ZNHIT6Q9NWK9 470 aaKnown RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 GOLGB1Q14789 3259 aaKnown RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 ABCC6O95255 1503 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 GOLGA6L7A0A1B0GV03 622 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 SMIM23A6NLE4 172 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 PLEKHA8P1O95397 391 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 MTIF2P46199 727 aaKnown RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 CDR1P51861 262 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 KIF5AQ12840 1032 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 NAA25Q14CX7 972 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 RABL6Q3YEC7 729 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-208ENST00000504387 WDR59Q6PJI9 974 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 RPAINQ86UA6 219 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC42Q96M95 316 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 MMRN2Q9H8L6 949 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 GGT7Q9UJ14 662 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 GRIN2DO15399 1336 aa8.51□□□□□ -1.05
NEDD9-208ENST00000504387 ANKRD18BA2A2Z9 1011 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 AKR1B10O60218 316 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 NF2P35240 595 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 PBX1P40424 430 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 SPRED3Q2MJR0 410 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 CDKAL1Q5VV42 579 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 SUGP1Q8IWZ8 645 aaKnown RBP8.5□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 MTRQ99707 1265 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 MAGEC2Q9UBF1 373 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-208ENST00000504387 ODF2LQ9ULJ1 636 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 XDHP47989 1333 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 FTCDO95954 541 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 EVX2Q03828 476 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 SPA17Q15506 151 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC178Q5BJE1 867 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 CEP85LQ5SZL2 805 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 CFAP58Q5T655 872 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 SHISA4Q96DD7 197 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 CEP89Q96ST8 783 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 RBM12Q9NTZ6 932 aaKnown RBP8.5□□□□□ -1.05
NEDD9-208ENST00000504387 HAUS2Q9NVX0 235 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 FAM184BQ9ULE4 1060 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 H7C1W4 665 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 IRS4O14654 1257 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-208ENST00000504387 FMNL1O95466 1100 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-208ENST00000504387 PDE6AP16499 860 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 USP8P40818 1118 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 AARSP49588 968 aaKnown RBP eCLIP8.5□□□□□ -1.05
NEDD9-208ENST00000504387 RASSF7Q02833 373 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 KANK3Q6NY19 840 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 C8orf74Q6P047 294 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 DDX42Q86XP3 938 aaKnown RBP eCLIP8.5□□□□□ -1.05
NEDD9-208ENST00000504387 CCDC155Q8N6L0 562 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 SPATA4Q8NEY3 305 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 ZKSCAN4Q969J2 545 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-208ENST00000504387 HAUS4Q9H6D7 363 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 NLRC4Q9NPP4 1024 aa8.5□□□□□ -1.05
NEDD9-208ENST00000504387 ANKARQ7Z5J8 1434 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 NMT2O60551 498 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 GLI1P08151 1106 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 LSP1P33241 339 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 CASP7P55210 303 aa8.49□□□□□ -1.05
NEDD9-208ENST00000504387 TDRD12Q587J7 1177 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms