RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 ADCY3O60266 1144 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 RFPL3O75679 317 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 TCEA3O75764 348 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 HTR3BO95264 441 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 MYL3P08590 195 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZSCAN20P17040 1043 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 PLCG1P19174 1290 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 SDSP20132 328 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 MCCP23508 829 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 AFF1P51825 1210 aaKnown RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 ETF1P62495 437 aaKnown RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 STRN3Q13033 797 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 TCIRG1Q13488 830 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 MYBPC2Q14324 1141 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 FOXB2Q5VYV0 432 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 MSL1Q68DK7 614 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 ADAMTSL4Q6UY14 1074 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 CHSY3Q70JA7 882 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 DDX46Q7L014 1031 aaKnown RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 PDZD3Q86UT5 571 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZBTB46Q86UZ6 589 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 MORC1Q86VD1 984 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 GALNT6Q8NCL4 622 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 VPS37AQ8NEZ2 397 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 ST13P5Q8NFI4 369 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 WDR66Q8TBY9 1149 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 LEO1Q8WVC0 666 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 EDARADDQ8WWZ3 215 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 JPH3Q8WXH2 748 aaPredicted RBP5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 PLPPR2Q96GM1 343 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 TM9SF2Q99805 663 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 LUZP4Q9P127 313 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 KLHL3Q9UH77 587 aa5.35□□□□□ -1.55
HMGB1P21-201ENST00000502313 HECW1Q76N89 1606 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 PCF11O94913 1555 aaKnown RBP5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 ADAMTS2O95450 1211 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 NBPF7P0C2Y1 421 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 TRIM27P14373 513 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 HALP42357 657 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 CASP7P55210 303 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 RAC1P63000 192 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 SETDB1Q15047 1291 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 SLC4A8Q2Y0W8 1093 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 L1TD1Q5T7N2 865 aaKnown RBP5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 ANO1Q5XXA6 986 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 HDGFL2Q7Z4V5 671 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZBTB38Q8NAP3 1195 aaPredicted RBP5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 TMEM40Q8WWA1 233 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 CCDC86Q9H6F5 360 aaKnown RBP5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 EHMT1Q9H9B1 1298 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 RRAGCQ9HB90 399 aa5.34□□□□□ -1.55
HMGB1P21-201ENST00000502313 ZMYM4Q5VZL5 1548 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 CEP162Q5TB80 1403 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 TNKSO95271 1327 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 E2F8A0AVK6 867 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 SPDYE3A6NKU9 549 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 DCDC2CA8MYV0 355 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 PIP5K1CO60331 668 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 ATE1O95260 518 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 PGRP06401 933 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 RAG1P15918 1043 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 GUCY2CP25092 1073 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 CD68P34810 354 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 CCNFP41002 786 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 PPM1FP49593 454 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 YARSP54577 528 aaKnown RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 PURAQ00577 322 aaKnown RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 PTPN11Q06124 597 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 PICALMQ13492 652 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 KCTD2Q14681 263 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 TRAPPC3LQ5T215 181 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 CCDC70Q6NSX1 233 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 LRRTM3Q86VH5 581 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 SKAP1Q86WV1 359 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 TPH2Q8IWU9 490 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 SMAP1Q8IYB5 467 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 ANKRD42Q8N9B4 389 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 C19orf47Q8N9M1 422 aaKnown RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 TEX19Q8NA77 164 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 ZSCAN1Q8NBB4 408 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 RBBP8NLQ8NC74 664 aaPredicted RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 PJA1Q8NG27 643 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 CHMP4CQ96CF2 233 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 SLC26A8Q96RN1 970 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 RHOBTB2Q9BYZ6 727 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 GMIPQ9P107 970 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 REV1Q9UBZ9 1251 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 PUF60Q9UHX1 559 aaKnown RBP5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 TACC3Q9Y6A5 838 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 KIF14Q15058 1648 aa5.33□□□□□ -1.56
HMGB1P21-201ENST00000502313 A0A1W2PQH9 124 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 PIK3R2O00459 728 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 APAF1O14727 1248 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 TIMM44O43615 452 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 VSIG8P0DPA2 414 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 SRGNP10124 158 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 NAT2P11245 290 aa5.32□□□□□ -1.56
HMGB1P21-201ENST00000502313 COPB2P35606 906 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms