RNA–Protein interactions for RNA: ENST00000490484.7

RBM39-236, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-236ENST00000490484 MKL1Q969V6 931 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 MAML3Q96JK9 1138 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 TEX13BQ9BXU2 312 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 TOMM22Q9NS69 142 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 CTDP1Q9Y5B0 961 aaPredicted RBP12.28□□□□□ -0.44
RBM39-236ENST00000490484 TACC3Q9Y6A5 838 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 PFASO15067 1338 aa12.28□□□□□ -0.44
RBM39-236ENST00000490484 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.44
RBM39-236ENST00000490484 MSCO60682 206 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 IGHA2P01877 340 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 HSPD1P10809 573 aaKnown RBP12.27□□□□□ -0.45
RBM39-236ENST00000490484 BMP3P12645 472 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 COPB2P35606 906 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 HAND2P61296 217 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 RRP12Q5JTH9 1297 aaKnown RBP12.27□□□□□ -0.45
RBM39-236ENST00000490484 ANO1Q5XXA6 986 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 CPXCR1Q8N123 301 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 PRPF38AQ8NAV1 312 aaKnown RBP12.27□□□□□ -0.45
RBM39-236ENST00000490484 OSBPL3Q9H4L5 887 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 IL17RBQ9NRM6 502 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 ANAPC4Q9UJX5 808 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 FEM1BQ9UK73 627 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 MTMR7Q9Y216 660 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 RIPK3Q9Y572 518 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 LAMA4Q16363 1823 aa12.27□□□□□ -0.45
RBM39-236ENST00000490484 ORC4O43929 436 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 ZBED4O75132 1171 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 FGAP02671 866 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 COL6A1P12109 1028 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 SDSP20132 328 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 SLC1A4P43007 532 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 STAT2P52630 851 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 IKQ13123 557 aaPredicted RBP12.26□□□□□ -0.45
RBM39-236ENST00000490484 ALX1Q15699 326 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 PPP4R3BQ5MIZ7 849 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 PRAMEF19Q5SWL8 479 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 CWC27Q6UX04 472 aaKnown RBP12.26□□□□□ -0.45
RBM39-236ENST00000490484 TICAM2Q86XR7 235 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 SLC38A10Q9HBR0 1119 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 RAVER2Q9HCJ3 691 aaKnown RBP12.26□□□□□ -0.45
RBM39-236ENST00000490484 DIAPH3Q9NSV4 1193 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 RBM27Q9P2N5 1060 aaKnown RBP12.26□□□□□ -0.45
RBM39-236ENST00000490484 ZMYM6O95789 1325 aa12.26□□□□□ -0.45
RBM39-236ENST00000490484 SZT2Q5T011 3432 aa12.25□□□□□ -0.45
RBM39-236ENST00000490484 TMEM232C9JQI7 657 aa12.25□□□□□ -0.45
RBM39-236ENST00000490484 MYCNP04198 464 aaPredicted RBP12.25□□□□□ -0.45
RBM39-236ENST00000490484 MCCP23508 829 aa12.25□□□□□ -0.45
RBM39-236ENST00000490484 KCTD1Q719H9 257 aa12.25□□□□□ -0.45
RBM39-236ENST00000490484 TBC1D10CQ8IV04 446 aa12.25□□□□□ -0.45
RBM39-236ENST00000490484 GMCL1Q96IK5 515 aa12.25□□□□□ -0.45
RBM39-236ENST00000490484 HOMER2Q9NSB8 354 aa12.25□□□□□ -0.45
RBM39-236ENST00000490484 ZMYND8Q9ULU4 1186 aaPredicted RBP12.25□□□□□ -0.45
RBM39-236ENST00000490484 ZNFX1Q9P2E3 1918 aaKnown RBP12.25□□□□□ -0.45
RBM39-236ENST00000490484 DNM1LO00429 736 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 ATP2A1O14983 1001 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 SEPT4O43236 478 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 FGRP09769 529 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 SYN1P17600 705 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 NEDD4P46934 1319 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 FXR1P51114 621 aaKnown RBP eCLIP12.24□□□□□ -0.45
RBM39-236ENST00000490484 MFAP1P55081 439 aaKnown RBP12.24□□□□□ -0.45
RBM39-236ENST00000490484 CCDC96Q2M329 555 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 ZNF792Q3KQV3 632 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 TINF2Q9BSI4 451 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 PCDH10Q9P2E7 1040 aa12.24□□□□□ -0.45
RBM39-236ENST00000490484 PDE4AP27815 886 aa12.23□□□□□ -0.45
RBM39-236ENST00000490484 OAZ1P54368 228 aa12.23□□□□□ -0.45
RBM39-236ENST00000490484 LRRC26Q2I0M4 334 aa12.23□□□□□ -0.45
RBM39-236ENST00000490484 GJC2Q5T442 439 aaPredicted RBP12.23□□□□□ -0.45
RBM39-236ENST00000490484 MFSD6Q6ZSS7 791 aa12.23□□□□□ -0.45
RBM39-236ENST00000490484 FAM160B2Q86V87 743 aa12.23□□□□□ -0.45
RBM39-236ENST00000490484 STAG1Q8WVM7 1258 aa12.23□□□□□ -0.45
RBM39-236ENST00000490484 LENG1Q96BZ8 264 aaPredicted RBP12.23□□□□□ -0.45
RBM39-236ENST00000490484 DDX11Q96FC9 970 aa12.23□□□□□ -0.45
RBM39-236ENST00000490484 SENP6Q9GZR1 1112 aaPredicted RBP12.23□□□□□ -0.45
RBM39-236ENST00000490484 DIS3Q9Y2L1 958 aaKnown RBP12.23□□□□□ -0.45
RBM39-236ENST00000490484 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
RBM39-236ENST00000490484 KBTBD13C9JR72 458 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 HIP1O00291 1037 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 TAL1P17542 331 aaPredicted RBP12.22□□□□□ -0.45
RBM39-236ENST00000490484 NOVP48745 357 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 ATN1P54259 1190 aaPredicted RBP12.22□□□□□ -0.45
RBM39-236ENST00000490484 SNAP25P60880 206 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 AKNAD1Q5T1N1 836 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 CCDC174Q6PII3 467 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 CHST13Q8NET6 341 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 CHURC1Q8WUH1 139 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 PRO3102Q9H379 93 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 RNF41Q9H4P4 317 aaPredicted RBP12.22□□□□□ -0.45
RBM39-236ENST00000490484 FBXO40Q9UH90 709 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 NRBP1Q9UHY1 535 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 PRR12Q9ULL5 1215 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 CNPY2Q9Y2B0 182 aa12.22□□□□□ -0.45
RBM39-236ENST00000490484 ZNF536O15090 1300 aa12.21□□□□□ -0.45
RBM39-236ENST00000490484 DNAJC25-GNG10A0A024R161 153 aa12.21□□□□□ -0.45
RBM39-236ENST00000490484 FDX1P10109 184 aa12.21□□□□□ -0.45
RBM39-236ENST00000490484 RARBP10826 455 aa12.21□□□□□ -0.45
RBM39-236ENST00000490484 TOP1P11387 765 aaKnown RBP12.21□□□□□ -0.45
RBM39-236ENST00000490484 PCP11498 1178 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms