RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 SNX12Q9UMY4 172 aa23.72■■□□□ 1.39
NSMCE4A-211ENST00000489266 FOXP2O15409 715 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 METAP2P50579 478 aaKnown RBP eCLIP23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 CUL5Q93034 780 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 OSBP2Q969R2 916 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 PURBQ96QR8 312 aaKnown RBP23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 PPANQ9NQ55 473 aaKnown RBP23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 LMO7Q8WWI1 1683 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 BCL9LQ86UU0 1499 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 RCCD1A6NED2 376 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 HMGB1P1B2RPK0 211 aaPredicted RBP23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 FGAP02671 866 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 PECAM1P16284 738 aaPredicted RBP23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 PPARAQ07869 468 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 TRAF1Q13077 416 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 MPRIPQ6WCQ1 1025 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 ZBTB10Q96DT7 871 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 DNAJC7Q99615 494 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 TAOK2Q9UL54 1235 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 TRPC6Q9Y210 931 aa23.71■■□□□ 1.39
NSMCE4A-211ENST00000489266 GMNCA6NCL1 334 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 BUB1BO60566 1050 aaPredicted RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 ELF3P78545 371 aaPredicted RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 NOSTRINQ8IVI9 506 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 PIK3R5Q8WYR1 880 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 STAMBPL1Q96FJ0 436 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 METTL22Q9BUU2 404 aaPredicted RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 CPSF2Q9P2I0 782 aaKnown RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 CCDC9Q9Y3X0 531 aaKnown RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 TTC26A0AVF1 554 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 TOB1P50616 345 aaPredicted RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 CAPRIN2Q6IMN6 1127 aaKnown RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 WDR59Q6PJI9 974 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 SMYD4Q8IYR2 804 aaPredicted RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 CCDC47Q96A33 483 aaKnown RBP23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 TBC1D31Q96DN5 1066 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 BORCS6Q96GS4 357 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 TAB2Q9NYJ8 693 aa23.7■■□□□ 1.38
NSMCE4A-211ENST00000489266 RNMTO43148 476 aaKnown RBP23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 VAV2P52735 878 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 SPAG1Q07617 926 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 MYO1EQ12965 1108 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 CRELD2Q6UXH1 353 aaPredicted RBP23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 SPDYE1Q8NFV5 336 aaPredicted RBP23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 P3H4Q92791 437 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 THOC1Q96FV9 657 aaKnown RBP23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 GPR108Q9NPR9 543 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 LEMD3Q9Y2U8 911 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 TTF1Q15361 905 aaPredicted RBP23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 PHKBQ93100 1093 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 NEUROD6Q96NK8 337 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 SPAG5Q96R06 1193 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 MYD88Q99836 296 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 NUP58Q9BVL2 599 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 ANGEL1Q9UNK9 670 aaKnown RBP23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 CTNND2Q9UQB3 1225 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 C15orf41Q9Y2V0 281 aa23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 SRPRBQ9Y5M8 271 aaKnown RBP23.69■■□□□ 1.38
NSMCE4A-211ENST00000489266 DPYDQ12882 1025 aa23.68■■□□□ 1.38
NSMCE4A-211ENST00000489266 MIS18BP1Q6P0N0 1132 aa23.68■■□□□ 1.38
NSMCE4A-211ENST00000489266 ZNF530Q6P9A1 599 aaPredicted RBP23.68■■□□□ 1.38
NSMCE4A-211ENST00000489266 NBPF5PQ86XG9 351 aaPredicted RBP23.68■■□□□ 1.38
NSMCE4A-211ENST00000489266 MREGQ8N565 214 aa23.68■■□□□ 1.38
NSMCE4A-211ENST00000489266 FAM210AQ96ND0 272 aa23.68■■□□□ 1.38
NSMCE4A-211ENST00000489266 ENO4A6NNW6 628 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 SMNDC1O75940 238 aaKnown RBP eCLIP23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 RPS6KA3P51812 740 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 QPCTQ16769 361 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 USP49Q70CQ1 688 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 SEC16BQ96JE7 1060 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 FER1L4A9Z1Z3 1794 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 GHRP10912 638 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 PRLRP16471 622 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 IARSP41252 1262 aaKnown RBP23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 MATR3P43243 847 aaKnown RBP eCLIP23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 BYSLQ13895 437 aaKnown RBP23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 NTRK3Q16288 839 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 FKBP15Q5T1M5 1219 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 ARFGAP2Q8N6H7 521 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 BAIAP2L1Q9UHR4 511 aa23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 LUC7L2Q9Y383 392 aaKnown RBP23.67■■□□□ 1.38
NSMCE4A-211ENST00000489266 C5orf60A6NFR6 353 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 TRAPPC3O43617 180 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 ZC3H12AQ5D1E8 599 aaKnown RBP23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 MSL1Q68DK7 614 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 GSDMAQ96QA5 445 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 DUSP10Q9Y6W6 482 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 IFIT1P09914 478 aaKnown RBP23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 AFMP43652 599 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 SLMAPQ14BN4 828 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 RILPL1Q5EBL4 403 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 TCP11X2Q5H9J9 407 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 SH3RF1Q7Z6J0 888 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 TCP11Q8WWU5 503 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 HVCN1Q96D96 273 aa23.66■■□□□ 1.38
NSMCE4A-211ENST00000489266 SPEF2Q9C093 1822 aa23.65■■□□□ 1.38
NSMCE4A-211ENST00000489266 ZNF213O14771 459 aa23.65■■□□□ 1.38
NSMCE4A-211ENST00000489266 COBLO75128 1261 aa23.65■■□□□ 1.38
NSMCE4A-211ENST00000489266 FAM153BP0C7A2 387 aa23.65■■□□□ 1.38
NSMCE4A-211ENST00000489266 CASP1P29466 404 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms