RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 RAVER2Q9HCJ3 691 aaKnown RBP16.61■□□□□ 0.25
VTI1A-206ENST00000489142 DIAPH3Q9NSV4 1193 aa16.61■□□□□ 0.25
VTI1A-206ENST00000489142 PCDH10Q9P2E7 1040 aa16.61■□□□□ 0.25
VTI1A-206ENST00000489142 TMEM232C9JQI7 657 aa16.6■□□□□ 0.25
VTI1A-206ENST00000489142 BMP3P12645 472 aa16.6■□□□□ 0.25
VTI1A-206ENST00000489142 MCCP23508 829 aa16.6■□□□□ 0.25
VTI1A-206ENST00000489142 ANO1Q5XXA6 986 aa16.6■□□□□ 0.25
VTI1A-206ENST00000489142 TBC1D10CQ8IV04 446 aa16.6■□□□□ 0.25
VTI1A-206ENST00000489142 ANKLE1Q8NAG6 615 aa16.6■□□□□ 0.25
VTI1A-206ENST00000489142 PRPF38AQ8NAV1 312 aaKnown RBP16.6■□□□□ 0.25
VTI1A-206ENST00000489142 COLQQ9Y215 455 aaPredicted RBP16.6■□□□□ 0.25
VTI1A-206ENST00000489142 CTDP1Q9Y5B0 961 aaPredicted RBP16.6■□□□□ 0.25
VTI1A-206ENST00000489142 ORC4O43929 436 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 EVI5O60447 810 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 IGHA2P01877 340 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 CYBAP13498 195 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 SNAP25P60880 206 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 IKQ13123 557 aaPredicted RBP16.59■□□□□ 0.25
VTI1A-206ENST00000489142 KCTD2Q14681 263 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 OLFML2BQ68BL8 750 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 KCTD1Q719H9 257 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 ABRAQ8N0Z2 381 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 MAML3Q96JK9 1138 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 TEX13BQ9BXU2 312 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 C11orf49Q9H6J7 331 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 DDX20Q9UHI6 824 aaKnown RBP16.59■□□□□ 0.25
VTI1A-206ENST00000489142 FEM1BQ9UK73 627 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 PFASO15067 1338 aa16.59■□□□□ 0.25
VTI1A-206ENST00000489142 ZBED4O75132 1171 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 GSPT1P15170 499 aaKnown RBP16.58■□□□□ 0.24
VTI1A-206ENST00000489142 SLC1A4P43007 532 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 HABP4Q5JVS0 413 aaKnown RBP16.58■□□□□ 0.24
VTI1A-206ENST00000489142 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 C7orf61Q8IZ16 206 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 IL25Q9H293 177 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 SLC38A10Q9HBR0 1119 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 HOMER2Q9NSB8 354 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 SYNPO2Q9UMS6 1093 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 ZMYM6O95789 1325 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 NEDD4P46934 1319 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 MCM3APO60318 1980 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 SMCHD1A6NHR9 2005 aa16.58■□□□□ 0.24
VTI1A-206ENST00000489142 FGRP09769 529 aa16.57■□□□□ 0.24
VTI1A-206ENST00000489142 TAL1P17542 331 aaPredicted RBP16.57■□□□□ 0.24
VTI1A-206ENST00000489142 STAT2P52630 851 aa16.57■□□□□ 0.24
VTI1A-206ENST00000489142 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
VTI1A-206ENST00000489142 TICAM2Q86XR7 235 aa16.57■□□□□ 0.24
VTI1A-206ENST00000489142 SLC5A4Q9NY91 659 aa16.57■□□□□ 0.24
VTI1A-206ENST00000489142 SLC34A2O95436 690 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 MYCNP04198 464 aaPredicted RBP16.56■□□□□ 0.24
VTI1A-206ENST00000489142 CAPN2P17655 700 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 MFAP1P55081 439 aaKnown RBP16.56■□□□□ 0.24
VTI1A-206ENST00000489142 CCDC96Q2M329 555 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 ZNF792Q3KQV3 632 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 AKNAD1Q5T1N1 836 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 CCDC174Q6PII3 467 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 MFSD6Q6ZSS7 791 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 GMCL1Q96IK5 515 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 ZKSCAN3Q9BRR0 538 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 NR2E3Q9Y5X4 410 aa16.56■□□□□ 0.24
VTI1A-206ENST00000489142 DNAH12Q6ZR08 3092 aa16.55■□□□□ 0.24
VTI1A-206ENST00000489142 FRMPD2Q68DX3 1309 aaPredicted RBP16.55■□□□□ 0.24
VTI1A-206ENST00000489142 COL6A1P12109 1028 aa16.55■□□□□ 0.24
VTI1A-206ENST00000489142 COPB2P35606 906 aa16.55■□□□□ 0.24
VTI1A-206ENST00000489142 STAG1Q8WVM7 1258 aa16.55■□□□□ 0.24
VTI1A-206ENST00000489142 AGBL1Q96MI9 1066 aa16.55■□□□□ 0.24
VTI1A-206ENST00000489142 TMEM47Q9BQJ4 181 aa16.55■□□□□ 0.24
VTI1A-206ENST00000489142 ZMYND8Q9ULU4 1186 aaPredicted RBP16.55■□□□□ 0.24
VTI1A-206ENST00000489142 HIP1O00291 1037 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 ZNF213O14771 459 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 ATP2A1O14983 1001 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 SYN1P17600 705 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 SLC16A2P36021 539 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 NOVP48745 357 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 LRRC26Q2I0M4 334 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 PPP4R3BQ5MIZ7 849 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 GJC2Q5T442 439 aaPredicted RBP16.54■□□□□ 0.24
VTI1A-206ENST00000489142 TTBK2Q6IQ55 1244 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 RCSD1Q6JBY9 416 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 FAM160B2Q86V87 743 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 CHURC1Q8WUH1 139 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 LENG1Q96BZ8 264 aaPredicted RBP16.54■□□□□ 0.24
VTI1A-206ENST00000489142 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 TINF2Q9BSI4 451 aa16.54■□□□□ 0.24
VTI1A-206ENST00000489142 SENP6Q9GZR1 1112 aaPredicted RBP16.54■□□□□ 0.24
VTI1A-206ENST00000489142 RBM27Q9P2N5 1060 aaKnown RBP16.54■□□□□ 0.24
VTI1A-206ENST00000489142 TRIOBPQ9H2D6 2365 aa16.53■□□□□ 0.24
VTI1A-206ENST00000489142 ZNF536O15090 1300 aa16.53■□□□□ 0.24
VTI1A-206ENST00000489142 SEPT4O43236 478 aa16.53■□□□□ 0.24
VTI1A-206ENST00000489142 ANKRD35Q8N283 1001 aa16.53■□□□□ 0.24
VTI1A-206ENST00000489142 GPCPD1Q9NPB8 672 aa16.53■□□□□ 0.24
VTI1A-206ENST00000489142 PRR12Q9ULL5 1215 aa16.53■□□□□ 0.24
VTI1A-206ENST00000489142 LCTP09848 1927 aa16.53■□□□□ 0.24
VTI1A-206ENST00000489142 B4E1Z4 1266 aa16.52■□□□□ 0.24
VTI1A-206ENST00000489142 MSCO60682 206 aa16.52■□□□□ 0.24
VTI1A-206ENST00000489142 TOP1P11387 765 aaKnown RBP16.52■□□□□ 0.24
VTI1A-206ENST00000489142 ALAS1P13196 640 aa16.52■□□□□ 0.24
VTI1A-206ENST00000489142 ATN1P54259 1190 aaPredicted RBP16.52■□□□□ 0.24
VTI1A-206ENST00000489142 DCAF4Q8WV16 495 aa16.52■□□□□ 0.24
VTI1A-206ENST00000489142 RNF146Q9NTX7 359 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms