RNA–Protein interactions for RNA: ENST00000483281.5

RXRB-204, Transcript of retinoid X receptor beta, humanhuman

TSL 5

Gene RXRB, Length 1,977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-204ENST00000483281 PARP14Q460N5 1801 aa24.04■■□□□ 1.44
RXRB-204ENST00000483281 PRPF3O43395 683 aaKnown RBP24.04■■□□□ 1.44
RXRB-204ENST00000483281 PABPC4Q13310 644 aaKnown RBP eCLIP24.04■■□□□ 1.44
RXRB-204ENST00000483281 GPAT2Q6NUI2 795 aa24.04■■□□□ 1.44
RXRB-204ENST00000483281 GADL1Q6ZQY3 521 aa24.04■■□□□ 1.44
RXRB-204ENST00000483281 PRPF38AQ8NAV1 312 aaKnown RBP24.04■■□□□ 1.44
RXRB-204ENST00000483281 UBE2Q2Q8WVN8 375 aa24.04■■□□□ 1.44
RXRB-204ENST00000483281 RNF26Q9BY78 433 aaPredicted RBP24.04■■□□□ 1.44
RXRB-204ENST00000483281 UBA5Q9GZZ9 404 aa24.04■■□□□ 1.44
RXRB-204ENST00000483281 RLFQ13129 1914 aa24.04■■□□□ 1.44
RXRB-204ENST00000483281 BAZ2BQ9UIF8 2168 aaKnown RBP24.04■■□□□ 1.44
RXRB-204ENST00000483281 CYTH3O43739 400 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 FDX1P10109 184 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 SLC35G1Q2M3R5 365 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 MYPNQ86TC9 1320 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 MTMR8Q96EF0 704 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 RBM27Q9P2N5 1060 aaKnown RBP24.03■■□□□ 1.44
RXRB-204ENST00000483281 MYH6P13533 1939 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 STK36Q9NRP7 1315 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 CCL15-CCL14A0A0B4J2E2 113 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 FMNL1O95466 1100 aaPredicted RBP24.03■■□□□ 1.44
RXRB-204ENST00000483281 HMGN5P82970 282 aaKnown RBP24.03■■□□□ 1.44
RXRB-204ENST00000483281 SSRP1Q08945 709 aaKnown RBP24.03■■□□□ 1.44
RXRB-204ENST00000483281 COG2Q14746 738 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 CCL15Q16663 113 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 TREML2Q5T2D2 321 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 SYDE2Q5VT97 1194 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 ADGRF4Q8IZF3 695 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 CMTR1Q8N1G2 835 aaKnown RBP24.03■■□□□ 1.44
RXRB-204ENST00000483281 HOXC10Q9NYD6 342 aa24.03■■□□□ 1.44
RXRB-204ENST00000483281 CNTNAP5Q8WYK1 1306 aa24.02■■□□□ 1.44
RXRB-204ENST00000483281 ANKRD23Q86SG2 305 aa24.02■■□□□ 1.44
RXRB-204ENST00000483281 BRI3BPQ8WY22 251 aa24.02■■□□□ 1.44
RXRB-204ENST00000483281 SLF1Q9BQI6 1058 aa24.02■■□□□ 1.44
RXRB-204ENST00000483281 JMJD4Q9H9V9 463 aa24.02■■□□□ 1.44
RXRB-204ENST00000483281 SLC16A2P36021 539 aa24.02■■□□□ 1.43
RXRB-204ENST00000483281 TRIM22Q8IYM9 498 aa24.02■■□□□ 1.43
RXRB-204ENST00000483281 CCDC82Q8N4S0 544 aa24.02■■□□□ 1.43
RXRB-204ENST00000483281 TANGO6Q9C0B7 1094 aa24.02■■□□□ 1.43
RXRB-204ENST00000483281 PRR12Q9ULL5 1215 aa24.02■■□□□ 1.43
RXRB-204ENST00000483281 ADAMTS5Q9UNA0 930 aa24.02■■□□□ 1.43
RXRB-204ENST00000483281 MKRN3Q13064 507 aaKnown RBP24.01■■□□□ 1.43
RXRB-204ENST00000483281 ZCCHC17Q9NP64 241 aaKnown RBP24.01■■□□□ 1.43
RXRB-204ENST00000483281 PPP1R9AQ9ULJ8 1098 aa24.01■■□□□ 1.43
RXRB-204ENST00000483281 ISY1Q9ULR0 285 aaKnown RBP24.01■■□□□ 1.43
RXRB-204ENST00000483281 V9GY48 417 aaPredicted RBP24.01■■□□□ 1.43
RXRB-204ENST00000483281 PTPDC1A2A3K4 754 aa24■■□□□ 1.43
RXRB-204ENST00000483281 FLOT1O75955 427 aa24■■□□□ 1.43
RXRB-204ENST00000483281 DSG3P32926 999 aa24■■□□□ 1.43
RXRB-204ENST00000483281 IKQ13123 557 aaPredicted RBP24■■□□□ 1.43
RXRB-204ENST00000483281 PHKBQ93100 1093 aa24■■□□□ 1.43
RXRB-204ENST00000483281 CPVLQ9H3G5 476 aa24■■□□□ 1.43
RXRB-204ENST00000483281 FBXO28Q9NVF7 368 aa24■■□□□ 1.43
RXRB-204ENST00000483281 DAXXQ9UER7 740 aaPredicted RBP24■■□□□ 1.43
RXRB-204ENST00000483281 SMC3Q9UQE7 1217 aa24■■□□□ 1.43
RXRB-204ENST00000483281 HSP90AA1P07900 732 aaKnown RBP24■■□□□ 1.43
RXRB-204ENST00000483281 FDPSP14324 419 aaKnown RBP24■■□□□ 1.43
RXRB-204ENST00000483281 REM2Q8IYK8 340 aaPredicted RBP24■■□□□ 1.43
RXRB-204ENST00000483281 RRP36Q96EU6 259 aaKnown RBP24■■□□□ 1.43
RXRB-204ENST00000483281 SLC26A6Q9BXS9 759 aa24■■□□□ 1.43
RXRB-204ENST00000483281 JAK2O60674 1132 aa23.99■■□□□ 1.43
RXRB-204ENST00000483281 DEXIO95424 95 aa23.99■■□□□ 1.43
RXRB-204ENST00000483281 OSBPP22059 807 aa23.99■■□□□ 1.43
RXRB-204ENST00000483281 TM4SF4P48230 202 aa23.99■■□□□ 1.43
RXRB-204ENST00000483281 AKAP17AQ02040 695 aaKnown RBP23.99■■□□□ 1.43
RXRB-204ENST00000483281 NOGQ13253 232 aa23.99■■□□□ 1.43
RXRB-204ENST00000483281 CYP4F22Q6NT55 531 aa23.99■■□□□ 1.43
RXRB-204ENST00000483281 LBX2Q6XYB7 198 aa23.99■■□□□ 1.43
RXRB-204ENST00000483281 VAT1LQ9HCJ6 419 aa23.99■■□□□ 1.43
RXRB-204ENST00000483281 ORC3Q9UBD5 711 aaPredicted RBP23.99■■□□□ 1.43
RXRB-204ENST00000483281 BTBD19C9JJ37 291 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 SLC4A3P48751 1232 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 PTPN18Q99952 460 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 RANBP17Q9H2T7 1088 aaKnown RBP23.98■■□□□ 1.43
RXRB-204ENST00000483281 CWC22Q9HCG8 908 aaKnown RBP23.98■■□□□ 1.43
RXRB-204ENST00000483281 PNMA6FA0A0J9YX94 578 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 ZBTB5O15062 677 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 SREBF2Q12772 1141 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 PKN1Q16512 942 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 WASF1Q92558 559 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 KIFC2Q96AC6 838 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 PNMA3Q9UL41 463 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 KIF3AQ9Y496 699 aa23.98■■□□□ 1.43
RXRB-204ENST00000483281 FAM43AQ8N2R8 423 aa23.97■■□□□ 1.43
RXRB-204ENST00000483281 RGS22Q8NE09 1264 aa23.97■■□□□ 1.43
RXRB-204ENST00000483281 CAPNS2Q96L46 248 aa23.97■■□□□ 1.43
RXRB-204ENST00000483281 PIGSQ96S52 555 aa23.97■■□□□ 1.43
RXRB-204ENST00000483281 ASCC2Q9H1I8 757 aaPredicted RBP23.97■■□□□ 1.43
RXRB-204ENST00000483281 GJB2P29033 226 aa23.96■■□□□ 1.43
RXRB-204ENST00000483281 PFKFB3Q16875 520 aaPredicted RBP23.96■■□□□ 1.43
RXRB-204ENST00000483281 P2RX7Q99572 595 aaKnown RBP23.96■■□□□ 1.43
RXRB-204ENST00000483281 SLC38A10Q9HBR0 1119 aa23.96■■□□□ 1.43
RXRB-204ENST00000483281 PDHXO00330 501 aa23.96■■□□□ 1.43
RXRB-204ENST00000483281 C1QTNF8P60827 252 aa23.96■■□□□ 1.43
RXRB-204ENST00000483281 IRX3P78415 501 aaPredicted RBP23.96■■□□□ 1.43
RXRB-204ENST00000483281 TRAF1Q13077 416 aa23.96■■□□□ 1.43
RXRB-204ENST00000483281 PAXIP1Q6ZW49 1069 aaPredicted RBP23.96■■□□□ 1.43
RXRB-204ENST00000483281 DDX11Q96FC9 970 aa23.96■■□□□ 1.43
RXRB-204ENST00000483281 SEC63Q9UGP8 760 aaKnown RBP23.96■■□□□ 1.43
RXRB-204ENST00000483281 PNMA2Q9UL42 364 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms