RNA–Protein interactions for RNA: ENST00000482596.1

CHD6-209, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best)

Gene CHD6, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-209ENST00000482596 FAM50BQ9Y247 325 aa8.38□□□□□ -1.07
CHD6-209ENST00000482596 SLC15A5A6NIM6 579 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 CDK7P50613 346 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 ACLYP53396 1101 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 ATXN1P54253 815 aaKnown RBP8.37□□□□□ -1.07
CHD6-209ENST00000482596 EIF4G2P78344 907 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD6-209ENST00000482596 SMAD2Q15796 467 aaKnown RBP8.37□□□□□ -1.07
CHD6-209ENST00000482596 CLUL1Q15846 466 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 NBPF20Q3BBV1 942 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 CRIPAKQ8N1N5 446 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 DCLK2Q8N568 766 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 MPHOSPH8Q99549 860 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 LRRFIP2Q9Y608 721 aaKnown RBP8.37□□□□□ -1.07
CHD6-209ENST00000482596 SIP14410 1827 aa8.37□□□□□ -1.07
CHD6-209ENST00000482596 RALGAPA2Q2PPJ7 1873 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 CTNND1O60716 968 aaKnown RBP8.36□□□□□ -1.07
CHD6-209ENST00000482596 CNMDO75829 334 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 GRB14Q14449 540 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 KRT24Q2M2I5 525 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 KIAA0319Q5VV43 1072 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 SH3BP5LQ7L8J4 393 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 RNF180Q86T96 592 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 FAM126BQ8IXS8 530 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 KCNG4Q8TDN1 519 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 POP1Q99575 1024 aaKnown RBP8.36□□□□□ -1.07
CHD6-209ENST00000482596 WNT8AQ9H1J5 351 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 TSPYL4Q9UJ04 414 aa8.36□□□□□ -1.07
CHD6-209ENST00000482596 IQSEC3Q9UPP2 1182 aaPredicted RBP8.36□□□□□ -1.07
CHD6-209ENST00000482596 DSPP15924 2871 aaKnown RBP8.36□□□□□ -1.07
CHD6-209ENST00000482596 DCDC2BA2VCK2 349 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 STXBP3O00186 592 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 ADAMTS4O75173 837 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 RARBP10826 455 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 ITGA6P23229 1130 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 LTBRP36941 435 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 GYG1P46976 350 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 DMWDQ09019 674 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 CHAF1AQ13111 956 aaPredicted RBP8.35□□□□□ -1.07
CHD6-209ENST00000482596 SH3D19Q5HYK7 790 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 CDC42EP5Q6NZY7 148 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 CCDC191Q8NCU4 936 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 ZNF280CQ8ND82 737 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 PABPC5Q96DU9 382 aaKnown RBP8.35□□□□□ -1.07
CHD6-209ENST00000482596 SCLYQ96I15 445 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 HIPK3Q9H422 1215 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 TSR3Q9UJK0 312 aaKnown RBP8.35□□□□□ -1.07
CHD6-209ENST00000482596 KNSTRNQ9Y448 316 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 PCDHGC5Q9Y5F6 944 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 MYO7AQ13402 2215 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 ATG2AQ2TAZ0 1938 aa8.35□□□□□ -1.07
CHD6-209ENST00000482596 MROH7Q68CQ1 1323 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 LOC400499M0QZD8 3231 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 FAM196BA6NMK8 535 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 MBTPS2O43462 519 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 CD4P01730 458 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 LMNAP02545 664 aaKnown RBP8.34□□□□□ -1.07
CHD6-209ENST00000482596 HOXA7P31268 230 aaPredicted RBP8.34□□□□□ -1.07
CHD6-209ENST00000482596 DLX2Q07687 328 aaPredicted RBP8.34□□□□□ -1.07
CHD6-209ENST00000482596 OLFML2BQ68BL8 750 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 NYAP1Q6ZVC0 841 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 HERC6Q8IVU3 1022 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 NUP133Q8WUM0 1156 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 CWC25Q9NXE8 425 aaPredicted RBP8.34□□□□□ -1.07
CHD6-209ENST00000482596 ITPR1Q14643 2758 aa8.34□□□□□ -1.07
CHD6-209ENST00000482596 COL4A3Q01955 1670 aa8.34□□□□□ -1.08
CHD6-209ENST00000482596 ZNF236Q9UL36 1845 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 TNKSO95271 1327 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 MYADML2A6NDP7 307 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 PLIN1O60240 522 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 GLRX3O76003 335 aaKnown RBP8.33□□□□□ -1.08
CHD6-209ENST00000482596 ARP10275 920 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 PPP4CP60510 307 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 MAP3K10Q02779 954 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 KCNA10Q16322 511 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 TMCO2Q7Z6W1 182 aaPredicted RBP8.33□□□□□ -1.08
CHD6-209ENST00000482596 RIPOR3Q96MK2 946 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 HINFPQ9BQA5 517 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 CLDND1Q9NY35 253 aa8.33□□□□□ -1.08
CHD6-209ENST00000482596 COL11A1P12107 1806 aaPredicted RBP8.33□□□□□ -1.08
CHD6-209ENST00000482596 CDK5RAP2Q96SN8 1893 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 WDFY3Q8IZQ1 3526 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 TEP1Q99973 2627 aaKnown RBP8.32□□□□□ -1.08
CHD6-209ENST00000482596 DDTLA6NHG4 134 aaPredicted RBP8.32□□□□□ -1.08
CHD6-209ENST00000482596 COBLO75128 1261 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 TAL1P17542 331 aaPredicted RBP8.32□□□□□ -1.08
CHD6-209ENST00000482596 MTMR2Q13614 643 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 HIC1Q14526 733 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 COL19A1Q14993 1142 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 TCEAL5Q5H9L2 206 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 CCSAPQ6IQ19 270 aaPredicted RBP8.32□□□□□ -1.08
CHD6-209ENST00000482596 LRSAM1Q6UWE0 723 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 DPP9Q86TI2 863 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 FAM84BQ96KN1 310 aaPredicted RBP8.32□□□□□ -1.08
CHD6-209ENST00000482596 SLC9A7Q96T83 725 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 TSEN34Q9BSV6 310 aaKnown RBP8.32□□□□□ -1.08
CHD6-209ENST00000482596 NOC4LQ9BVI4 516 aaKnown RBP8.32□□□□□ -1.08
CHD6-209ENST00000482596 IVNS1ABPQ9Y6Y0 642 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 IGF2RP11717 2491 aa8.32□□□□□ -1.08
CHD6-209ENST00000482596 SYNRGQ9UMZ2 1314 aa8.31□□□□□ -1.08
CHD6-209ENST00000482596 TENM4Q6N022 2769 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms