RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 NUCB1Q02818 461 aa21.83■■□□□ 1.09
DNMT3A-210ENST00000474807 KCTD2Q14681 263 aa21.83■■□□□ 1.09
DNMT3A-210ENST00000474807 ZNF792Q3KQV3 632 aa21.83■■□□□ 1.09
DNMT3A-210ENST00000474807 PRAMEF19Q5SWL8 479 aa21.83■■□□□ 1.09
DNMT3A-210ENST00000474807 SLFN13Q68D06 897 aa21.83■■□□□ 1.09
DNMT3A-210ENST00000474807 SNRNP48Q6IEG0 339 aaKnown RBP21.83■■□□□ 1.09
DNMT3A-210ENST00000474807 OSBPL3Q9H4L5 887 aa21.83■■□□□ 1.09
DNMT3A-210ENST00000474807 FEM1BQ9UK73 627 aa21.83■■□□□ 1.09
DNMT3A-210ENST00000474807 SEPT4O43236 478 aa21.82■■□□□ 1.08
DNMT3A-210ENST00000474807 FGRP09769 529 aa21.82■■□□□ 1.08
DNMT3A-210ENST00000474807 BMP3P12645 472 aa21.82■■□□□ 1.08
DNMT3A-210ENST00000474807 PLEKHM2Q8IWE5 1019 aa21.82■■□□□ 1.08
DNMT3A-210ENST00000474807 KIFC2Q96AC6 838 aa21.82■■□□□ 1.08
DNMT3A-210ENST00000474807 SLC38A10Q9HBR0 1119 aa21.82■■□□□ 1.08
DNMT3A-210ENST00000474807 IL17RBQ9NRM6 502 aa21.82■■□□□ 1.08
DNMT3A-210ENST00000474807 PCDH10Q9P2E7 1040 aa21.82■■□□□ 1.08
DNMT3A-210ENST00000474807 PLXNA1Q9UIW2 1896 aa21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 TSPY2A6NKD2 308 aa21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 TRIM6-TRIM34B2RNG4 842 aa21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 DNM1LO00429 736 aa21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 ZBED4O75132 1171 aa21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 FGAP02671 866 aa21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 NMIQ13287 307 aaPredicted RBP21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 LRRC26Q2I0M4 334 aa21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 ZNF589Q86UQ0 364 aaPredicted RBP21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 TINF2Q9BSI4 451 aa21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 ZMYND8Q9ULU4 1186 aaPredicted RBP21.81■■□□□ 1.08
DNMT3A-210ENST00000474807 ORC4O43929 436 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 HSPD1P10809 573 aaKnown RBP21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 NOVP48745 357 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 PPP4R3BQ5MIZ7 849 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 ANO1Q5XXA6 986 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 CPXCR1Q8N123 301 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 RILPL2Q969X0 211 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 GMCL1Q96IK5 515 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 GDF15Q99988 308 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 SENP6Q9GZR1 1112 aaPredicted RBP21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 RAVER2Q9HCJ3 691 aaKnown RBP21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 NRBP1Q9UHY1 535 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 STX8Q9UNK0 236 aa21.8■■□□□ 1.08
DNMT3A-210ENST00000474807 A0A1W2PPC1 479 aa21.79■■□□□ 1.08
DNMT3A-210ENST00000474807 NMT2O60551 498 aa21.79■■□□□ 1.08
DNMT3A-210ENST00000474807 OAZ1P54368 228 aa21.79■■□□□ 1.08
DNMT3A-210ENST00000474807 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.79■■□□□ 1.08
DNMT3A-210ENST00000474807 ZMYM6O95789 1325 aa21.79■■□□□ 1.08
DNMT3A-210ENST00000474807 DNAJC25-GNG10A0A024R161 153 aa21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 TMEM232C9JQI7 657 aa21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 RANBP6O60518 1105 aaKnown RBP21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 SYN1P17600 705 aa21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 SDSP20132 328 aa21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 GJC2Q5T442 439 aaPredicted RBP21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 ARRDC4Q8NCT1 418 aa21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 CTDP1Q9Y5B0 961 aaPredicted RBP21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 CCDC171Q6TFL3 1326 aa21.78■■□□□ 1.08
DNMT3A-210ENST00000474807 FDX1P10109 184 aa21.77■■□□□ 1.08
DNMT3A-210ENST00000474807 MCCP23508 829 aa21.77■■□□□ 1.08
DNMT3A-210ENST00000474807 BMP8BP34820 402 aa21.77■■□□□ 1.08
DNMT3A-210ENST00000474807 SLC1A4P43007 532 aa21.77■■□□□ 1.08
DNMT3A-210ENST00000474807 STAT2P52630 851 aa21.77■■□□□ 1.08
DNMT3A-210ENST00000474807 STAG1Q8WVM7 1258 aa21.77■■□□□ 1.08
DNMT3A-210ENST00000474807 SUPT16HQ9Y5B9 1047 aaKnown RBP21.77■■□□□ 1.08
DNMT3A-210ENST00000474807 PLA2G6O60733 806 aa21.76■■□□□ 1.07
DNMT3A-210ENST00000474807 ZNF865P0CJ78 1059 aaPredicted RBP21.76■■□□□ 1.07
DNMT3A-210ENST00000474807 TAL1P17542 331 aaPredicted RBP21.76■■□□□ 1.07
DNMT3A-210ENST00000474807 SLC4A3P48751 1232 aa21.76■■□□□ 1.07
DNMT3A-210ENST00000474807 FAM160B2Q86V87 743 aa21.76■■□□□ 1.07
DNMT3A-210ENST00000474807 MSL3Q8N5Y2 521 aaKnown RBP21.76■■□□□ 1.07
DNMT3A-210ENST00000474807 CHURC1Q8WUH1 139 aa21.76■■□□□ 1.07
DNMT3A-210ENST00000474807 DDX11Q96FC9 970 aa21.76■■□□□ 1.07
DNMT3A-210ENST00000474807 SMCHD1A6NHR9 2005 aa21.75■■□□□ 1.07
DNMT3A-210ENST00000474807 RCSD1Q6JBY9 416 aa21.75■■□□□ 1.07
DNMT3A-210ENST00000474807 MAMDC4Q6UXC1 1216 aa21.75■■□□□ 1.07
DNMT3A-210ENST00000474807 CHST13Q8NET6 341 aa21.75■■□□□ 1.07
DNMT3A-210ENST00000474807 CHMP4CQ96CF2 233 aa21.75■■□□□ 1.07
DNMT3A-210ENST00000474807 FBXO40Q9UH90 709 aa21.75■■□□□ 1.07
DNMT3A-210ENST00000474807 ZNF536O15090 1300 aa21.75■■□□□ 1.07
DNMT3A-210ENST00000474807 KBTBD13C9JR72 458 aa21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 MAGEA10P43363 369 aaPredicted RBP21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 ATN1P54259 1190 aaPredicted RBP21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 LRRC41Q15345 812 aa21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 KCTD1Q719H9 257 aa21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 RASGRP2Q7LDG7 609 aa21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 ZNF467Q7Z7K2 595 aaPredicted RBP21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 TOMM22Q9NS69 142 aa21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 TCP11L1Q9NUJ3 509 aa21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 ISY1Q9ULR0 285 aaKnown RBP21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 SYNGAP1Q96PV0 1343 aa21.74■■□□□ 1.07
DNMT3A-210ENST00000474807 SNAI1O95863 264 aaPredicted RBP21.73■■□□□ 1.07
DNMT3A-210ENST00000474807 RARBP10826 455 aa21.73■■□□□ 1.07
DNMT3A-210ENST00000474807 MFAP1P55081 439 aaKnown RBP21.73■■□□□ 1.07
DNMT3A-210ENST00000474807 HAND2P61296 217 aa21.73■■□□□ 1.07
DNMT3A-210ENST00000474807 RRP12Q5JTH9 1297 aaKnown RBP21.73■■□□□ 1.07
DNMT3A-210ENST00000474807 ANKRD35Q8N283 1001 aa21.73■■□□□ 1.07
DNMT3A-210ENST00000474807 FGD4Q96M96 766 aa21.73■■□□□ 1.07
DNMT3A-210ENST00000474807 CNPY2Q9Y2B0 182 aa21.73■■□□□ 1.07
DNMT3A-210ENST00000474807 AKR1A1P14550 325 aa21.72■■□□□ 1.07
DNMT3A-210ENST00000474807 IKQ13123 557 aaPredicted RBP21.72■■□□□ 1.07
DNMT3A-210ENST00000474807 AKNAD1Q5T1N1 836 aa21.72■■□□□ 1.07
DNMT3A-210ENST00000474807 SLC39A5Q6ZMH5 540 aa21.72■■□□□ 1.07
DNMT3A-210ENST00000474807 AGBL1Q96MI9 1066 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms