RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 TEX13BQ9BXU2 312 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 SLC5A4Q9NY91 659 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 PLXNA1Q9UIW2 1896 aa10.71□□□□□ -0.69
USF1-204ENST00000472217 ZMYM6O95789 1325 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 CCDC171Q6TFL3 1326 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 ATP2A1O14983 1001 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 NMT2O60551 498 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 MSCO60682 206 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 FGAP02671 866 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 HSPD1P10809 573 aaKnown RBP10.7□□□□□ -0.7
USF1-204ENST00000472217 COPB2P35606 906 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 SLFN13Q68D06 897 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 KIFC2Q96AC6 838 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 IL17RBQ9NRM6 502 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 RBM27Q9P2N5 1060 aaKnown RBP10.7□□□□□ -0.7
USF1-204ENST00000472217 FEM1BQ9UK73 627 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 RIPK3Q9Y572 518 aa10.7□□□□□ -0.7
USF1-204ENST00000472217 ZNFX1Q9P2E3 1918 aaKnown RBP10.7□□□□□ -0.7
USF1-204ENST00000472217 TMEM232C9JQI7 657 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 ORC4O43929 436 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 RANBP6O60518 1105 aaKnown RBP10.69□□□□□ -0.7
USF1-204ENST00000472217 ZBED4O75132 1171 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 FGRP09769 529 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 BMP3P12645 472 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 SDSP20132 328 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 FXR1P51114 621 aaKnown RBP eCLIP10.69□□□□□ -0.7
USF1-204ENST00000472217 ZNF792Q3KQV3 632 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 PPP4R3BQ5MIZ7 849 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 PRAMEF19Q5SWL8 479 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 ANO1Q5XXA6 986 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 RASGRP2Q7LDG7 609 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 CPXCR1Q8N123 301 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 CHMP4CQ96CF2 233 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 GMCL1Q96IK5 515 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 PRO3102Q9H379 93 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 SLC38A10Q9HBR0 1119 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 RAVER2Q9HCJ3 691 aaKnown RBP10.69□□□□□ -0.7
USF1-204ENST00000472217 TOMM22Q9NS69 142 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 ISY1Q9ULR0 285 aaKnown RBP10.69□□□□□ -0.7
USF1-204ENST00000472217 STX8Q9UNK0 236 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 CTDP1Q9Y5B0 961 aaPredicted RBP10.69□□□□□ -0.7
USF1-204ENST00000472217 LAMA4Q16363 1823 aa10.69□□□□□ -0.7
USF1-204ENST00000472217 DNM1LO00429 736 aa10.68□□□□□ -0.7
USF1-204ENST00000472217 SEPT4O43236 478 aa10.68□□□□□ -0.7
USF1-204ENST00000472217 MCCP23508 829 aa10.68□□□□□ -0.7
USF1-204ENST00000472217 SLC1A4P43007 532 aa10.68□□□□□ -0.7
USF1-204ENST00000472217 SLC4A3P48751 1232 aa10.68□□□□□ -0.7
USF1-204ENST00000472217 STAT2P52630 851 aa10.68□□□□□ -0.7
USF1-204ENST00000472217 LRRC26Q2I0M4 334 aa10.68□□□□□ -0.7
USF1-204ENST00000472217 RRP12Q5JTH9 1297 aaKnown RBP10.68□□□□□ -0.7
USF1-204ENST00000472217 TINF2Q9BSI4 451 aa10.68□□□□□ -0.7
USF1-204ENST00000472217 ZMYND8Q9ULU4 1186 aaPredicted RBP10.68□□□□□ -0.7
USF1-204ENST00000472217 DIS3Q9Y2L1 958 aaKnown RBP10.68□□□□□ -0.7
USF1-204ENST00000472217 DNAJC25-GNG10A0A024R161 153 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 TAL1P17542 331 aaPredicted RBP10.67□□□□□ -0.7
USF1-204ENST00000472217 SYN1P17600 705 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 NOVP48745 357 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 OAZ1P54368 228 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 MFAP1P55081 439 aaKnown RBP10.67□□□□□ -0.7
USF1-204ENST00000472217 HAND2P61296 217 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
USF1-204ENST00000472217 IKQ13123 557 aaPredicted RBP10.67□□□□□ -0.7
USF1-204ENST00000472217 GJC2Q5T442 439 aaPredicted RBP10.67□□□□□ -0.7
USF1-204ENST00000472217 KCTD1Q719H9 257 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.67□□□□□ -0.7
USF1-204ENST00000472217 FAM160B2Q86V87 743 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 TBC1D10CQ8IV04 446 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 STAG1Q8WVM7 1258 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 DDX11Q96FC9 970 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 SENP6Q9GZR1 1112 aaPredicted RBP10.67□□□□□ -0.7
USF1-204ENST00000472217 DIAPH3Q9NSV4 1193 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 NRBP1Q9UHY1 535 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 MTMR7Q9Y216 660 aa10.67□□□□□ -0.7
USF1-204ENST00000472217 CEP290O15078 2479 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 ZNF536O15090 1300 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 KBTBD13C9JR72 458 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 FDX1P10109 184 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 PDE4AP27815 886 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 RCSD1Q6JBY9 416 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 CWC27Q6UX04 472 aaKnown RBP10.66□□□□□ -0.7
USF1-204ENST00000472217 ARRDC4Q8NCT1 418 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 CHST13Q8NET6 341 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 CHURC1Q8WUH1 139 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 GDF15Q99988 308 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 HOMER2Q9NSB8 354 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 PCDH10Q9P2E7 1040 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 FBXO40Q9UH90 709 aa10.66□□□□□ -0.7
USF1-204ENST00000472217 NEDD4P46934 1319 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 PLA2G6O60733 806 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 MYCNP04198 464 aaPredicted RBP10.65□□□□□ -0.7
USF1-204ENST00000472217 ZNF865P0CJ78 1059 aaPredicted RBP10.65□□□□□ -0.7
USF1-204ENST00000472217 TOP1P11387 765 aaKnown RBP10.65□□□□□ -0.7
USF1-204ENST00000472217 ATN1P54259 1190 aaPredicted RBP10.65□□□□□ -0.7
USF1-204ENST00000472217 CCDC96Q2M329 555 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 AKNAD1Q5T1N1 836 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 MAMDC4Q6UXC1 1216 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 MFSD6Q6ZSS7 791 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 ANKRD35Q8N283 1001 aa10.65□□□□□ -0.7
USF1-204ENST00000472217 MSL3Q8N5Y2 521 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms