RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 TBC1D9Q6ZT07 1266 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 ACER1Q8TDN7 264 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 XAGE2Q96GT9 111 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 SLC9A7Q96T83 725 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 PRRX2Q99811 253 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 LMCD1Q9NZU5 365 aa12.56□□□□□ -0.4
CDHR3-209ENST00000472116 A0A1B0GUL7 405 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 GFRA3O60609 400 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 FLOT1O75955 427 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 KCNA5P22460 613 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 TIMM10P62072 90 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 LEXMQ3ZCV2 418 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 CCSAPQ6IQ19 270 aaPredicted RBP12.55□□□□□ -0.4
CDHR3-209ENST00000472116 PTCRAQ6ISU1 281 aaPredicted RBP12.55□□□□□ -0.4
CDHR3-209ENST00000472116 MSL3Q8N5Y2 521 aaKnown RBP12.55□□□□□ -0.4
CDHR3-209ENST00000472116 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 FAM50BQ9Y247 325 aa12.55□□□□□ -0.4
CDHR3-209ENST00000472116 MYO5AQ9Y4I1 1855 aaKnown RBP12.55□□□□□ -0.4
CDHR3-209ENST00000472116 MYADML2A6NDP7 307 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 EPOPA6NHQ4 379 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 CD4P01730 458 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 IL9P15248 144 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 COPB2P35606 906 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 TAP1Q03518 808 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 ZNF792Q3KQV3 632 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 TATDN1Q6P1N9 297 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 NEUROD6Q96NK8 337 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 PHOX2BQ99453 314 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 SEZ6LQ9BYH1 1024 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
CDHR3-209ENST00000472116 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 CFAP54Q96N23 3096 aa12.54□□□□□ -0.4
CDHR3-209ENST00000472116 CABYRO75952 493 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 PPP4CP60510 307 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 HFE2Q6ZVN8 426 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 TTC6Q86TZ1 520 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 PHOSPHO2Q8TCD6 241 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
CDHR3-209ENST00000472116 SSUH2Q9Y2M2 353 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 SIP14410 1827 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 CACNA1BQ00975 2339 aa12.53□□□□□ -0.4
CDHR3-209ENST00000472116 MPHOSPH10O00566 681 aaKnown RBP12.52□□□□□ -0.41
CDHR3-209ENST00000472116 USP5P45974 858 aa12.52□□□□□ -0.41
CDHR3-209ENST00000472116 GJA9P57773 515 aa12.52□□□□□ -0.41
CDHR3-209ENST00000472116 PI16Q6UXB8 463 aa12.52□□□□□ -0.41
CDHR3-209ENST00000472116 ATG4CQ96DT6 458 aa12.52□□□□□ -0.41
CDHR3-209ENST00000472116 WNT8AQ9H1J5 351 aa12.52□□□□□ -0.41
CDHR3-209ENST00000472116 EHD4Q9H223 541 aa12.52□□□□□ -0.41
CDHR3-209ENST00000472116 HDAC5Q9UQL6 1122 aa12.52□□□□□ -0.41
CDHR3-209ENST00000472116 POTEB3A0JP26 581 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 C19orf67A6NJJ6 358 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 UQCRFS1P1P0C7P4 283 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 UBTFL1P0CB47 393 aaPredicted RBP12.51□□□□□ -0.41
CDHR3-209ENST00000472116 TTLL4Q14679 1199 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 POTEBQ6S5H4 581 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 ERMP1Q7Z2K6 904 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 DEFB128Q7Z7B8 93 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 RIOX2Q8IUF8 465 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 WDR63Q8IWG1 891 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.51□□□□□ -0.41
CDHR3-209ENST00000472116 DDX11Q96FC9 970 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 SCLYQ96I15 445 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 UPF3AQ9H1J1 476 aaKnown RBP12.51□□□□□ -0.41
CDHR3-209ENST00000472116 SH2D4AQ9H788 454 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 PA2G4Q9UQ80 394 aaKnown RBP12.51□□□□□ -0.41
CDHR3-209ENST00000472116 PTPRCP08575 1304 aa12.51□□□□□ -0.41
CDHR3-209ENST00000472116 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.5□□□□□ -0.41
CDHR3-209ENST00000472116 GRXCR2A6NFK2 248 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 ZEB2O60315 1214 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 ITGA7Q13683 1181 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 ACVR2BQ13705 512 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 TMEM132BQ14DG7 1078 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 SEPT2Q15019 361 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 PKN1Q16512 942 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 NOL8Q76FK4 1167 aaKnown RBP12.5□□□□□ -0.41
CDHR3-209ENST00000472116 CERS3Q8IU89 383 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 HERC6Q8IVU3 1022 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 GDPD5Q8WTR4 605 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 IRF2BPLQ9H1B7 796 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 ABHD16BQ9H3Z7 469 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 PRKAG3Q9UGI9 489 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 NAV1Q8NEY1 1877 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
CDHR3-209ENST00000472116 TECTAO75443 2155 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 TRIP12Q14669 1992 aaPredicted RBP12.49□□□□□ -0.41
CDHR3-209ENST00000472116 ARID4AP29374 1257 aaPredicted RBP12.49□□□□□ -0.41
CDHR3-209ENST00000472116 STAT3P40763 770 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 KCNJ6P48051 423 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 CCDC144BQ3MJ40 725 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 CXCL17Q6UXB2 119 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 SUGP1Q8IWZ8 645 aaKnown RBP12.49□□□□□ -0.41
CDHR3-209ENST00000472116 PRSS33Q8NF86 280 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 ZBED2Q9BTP6 218 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 FTOQ9C0B1 505 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDHR3-209ENST00000472116 ARHGEF10LQ9HCE6 1279 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 COPRSQ9NQ92 184 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 PTPRSQ13332 1948 aa12.49□□□□□ -0.41
CDHR3-209ENST00000472116 B4GALT4O60513 344 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms