RNA–Protein interactions for RNA: ENST00000472017.1

PRKCZ-213, Transcript of protein kinase C zeta, human

TSL 4

Gene PRKCZ, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCZ-213	ENST00000472017	RANBP6	O60518	1105 aa	Known RBP	13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	HSPD1	P10809	573 aa	Known RBP	13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	BMP3	P12645	472 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	CYBA	P13498	195 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	SDS	P20132	328 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	MFAP1	P55081	439 aa	Known RBP	13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	SNRNP48	Q6IEG0	339 aa	Known RBP	13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	CHRDL2	Q6WN34	429 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	TRPV1	Q8NER1	839 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	KIFC2	Q96AC6	838 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	MAML3	Q96JK9	1138 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	TEX13B	Q9BXU2	312 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	STX8	Q9UNK0	236 aa		13.9	□□□□□ -0.18
PRKCZ-213	ENST00000472017	CCDC171	Q6TFL3	1326 aa		13.9	□□□□□ -0.19
PRKCZ-213	ENST00000472017	MCM3AP	O60318	1980 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	PGK2	P07205	417 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	SLC4A3	P48751	1232 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	CPXCR1	Q8N123	301 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	IL17RB	Q9NRM6	502 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	TOMM22	Q9NS69	142 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ISY1	Q9ULR0	285 aa	Known RBP	13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	TACC3	Q9Y6A5	838 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	PFAS	O15067	1338 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ZMYM6	O95789	1325 aa		13.89	□□□□□ -0.19
PRKCZ-213	ENST00000472017	TMEM232	C9JQI7	657 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ATP2A1	O14983	1001 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	NMT2	O60551	498 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	FGR	P09769	529 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	FDX1	P10109	184 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	COL6A1	P12109	1028 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ZNF792	Q3KQV3	632 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	RRP12	Q5JTH9	1297 aa	Known RBP	13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	C7orf61	Q8IZ16	206 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	CHURC1	Q8WUH1	139 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	GMCL1	Q96IK5	515 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	SLC38A10	Q9HBR0	1119 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	RAVER2	Q9HCJ3	691 aa	Known RBP	13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	DIS3	Q9Y2L1	958 aa	Known RBP	13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	RIPK3	Q9Y572	518 aa		13.88	□□□□□ -0.19
PRKCZ-213	ENST00000472017	RANBP2	P49792	3224 aa	Known RBP	13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	HIP1	O00291	1037 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	SEPT4	O43236	478 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	MCC	P23508	829 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	SLC1A4	P43007	532 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	STAT2	P52630	851 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	OAZ1	P54368	228 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	IRX6	P78412	446 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	IK	Q13123	557 aa	Predicted RBP	13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	PRAMEF19	Q5SWL8	479 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	CWC27	Q6UX04	472 aa	Known RBP	13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	FAM160B2	Q86V87	743 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	STAG1	Q8WVM7	1258 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	CHMP4C	Q96CF2	233 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	DDX11	Q96FC9	970 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	TINF2	Q9BSI4	451 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	DIAPH3	Q9NSV4	1193 aa		13.87	□□□□□ -0.19
PRKCZ-213	ENST00000472017	DNM1L	O00429	736 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	NOV	P48745	357 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	HAND2	P61296	217 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ANO1	Q5XXA6	986 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	RCSD1	Q6JBY9	416 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	MFSD6	Q6ZSS7	791 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ARRDC4	Q8NCT1	418 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	RBM27	Q9P2N5	1060 aa	Known RBP	13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	FBXO40	Q9UH90	709 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	NRBP1	Q9UHY1	535 aa		13.86	□□□□□ -0.19
PRKCZ-213	ENST00000472017	PLA2G6	O60733	806 aa		13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	PC	P11498	1178 aa	Known RBP	13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	FXR1	P51114	621 aa	Known RBP eCLIP	13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	AKNAD1	Q5T1N1	836 aa		13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	KCTD1	Q719H9	257 aa		13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ANKRD35	Q8N283	1001 aa		13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	CHST13	Q8NET6	341 aa		13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	PRO3102	Q9H379	93 aa		13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	TCP11L1	Q9NUJ3	509 aa		13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	MTMR7	Q9Y216	660 aa		13.85	□□□□□ -0.19
PRKCZ-213	ENST00000472017	DNAJC25-GNG10	A0A024R161	153 aa		13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	ZNF213	O14771	459 aa		13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	TOP1	P11387	765 aa	Known RBP	13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	LRRC26	Q2I0M4	334 aa		13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	GJC2	Q5T442	439 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	MSL3	Q8N5Y2	521 aa	Known RBP	13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	DCAF4	Q8WV16	495 aa		13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	RNF41	Q9H4P4	317 aa	Predicted RBP	13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	CNPY2	Q9Y2B0	182 aa		13.84	□□□□□ -0.19
PRKCZ-213	ENST00000472017	KBTBD13	C9JR72	458 aa		13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	MYCN	P04198	464 aa	Predicted RBP	13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	TAL1	P17542	331 aa	Predicted RBP	13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	SYN1	P17600	705 aa		13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	PDE4A	P27815	886 aa		13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	CCDC96	Q2M329	555 aa		13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	RASGRP2	Q7LDG7	609 aa		13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	TBC1D10C	Q8IV04	446 aa		13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	AGBL1	Q96MI9	1066 aa		13.83	□□□□□ -0.2
PRKCZ-213	ENST00000472017	TMEM47	Q9BQJ4	181 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms