RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 TMEM164Q5U3C3 297 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 FAM117BQ6P1L5 589 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 INTS5Q6P9B9 1019 aaKnown RBP5.04□□□□□ -1.6
LRCH3-213ENST00000471667 NBPF5PQ86XG9 351 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-213ENST00000471667 NCAPG2Q86XI2 1143 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 CEP120Q8N960 986 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 KLHL23Q8NBE8 558 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 TMC1Q8TDI8 760 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 ATXN2LQ8WWM7 1075 aaKnown RBP5.04□□□□□ -1.6
LRCH3-213ENST00000471667 UTP4Q969X6 686 aaKnown RBP5.04□□□□□ -1.6
LRCH3-213ENST00000471667 CDCA5Q96FF9 252 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 FAM46AQ96IP4 442 aaKnown RBP5.04□□□□□ -1.6
LRCH3-213ENST00000471667 GDF15Q99988 308 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 SH2B1Q9NRF2 756 aaPredicted RBP5.04□□□□□ -1.6
LRCH3-213ENST00000471667 LAMB4A4D0S4 1761 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 TONSLQ96HA7 1378 aa5.04□□□□□ -1.6
LRCH3-213ENST00000471667 SPTBN5Q9NRC6 3674 aaKnown RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 VCANP13611 3396 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 AFDNP55196 1824 aaKnown RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 FAM177BA6PVY3 158 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 DDX3YO15523 660 aaKnown RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 GJA8P48165 433 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 PRMT2P55345 433 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 UBXN2AP68543 259 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 CXCL9Q07325 125 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 NFIAQ12857 509 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 TBC1D9BQ66K14 1250 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 ZDHHC13Q8IUH4 622 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 TRIM42Q8IWZ5 723 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 FOXD4L4Q8WXT5 416 aaPredicted RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 CLP1Q92989 425 aaKnown RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 POP1Q99575 1024 aaKnown RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 CDX2Q99626 313 aaPredicted RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 C7orf69Q9H7B7 122 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 ELP3Q9H9T3 547 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 GOLGA2P5Q9HBQ8 144 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 PTCH2Q9Y6C5 1203 aa5.03□□□□□ -1.6
LRCH3-213ENST00000471667 EDC4Q6P2E9 1401 aaKnown RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 COL5A3P25940 1745 aaPredicted RBP5.03□□□□□ -1.6
LRCH3-213ENST00000471667 FAM205AQ6ZU69 1335 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 RANBP2P49792 3224 aaKnown RBP5.02□□□□□ -1.61
LRCH3-213ENST00000471667 ADAM11O75078 769 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 GJB1P08034 283 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 CANXP27824 592 aaKnown RBP5.02□□□□□ -1.61
LRCH3-213ENST00000471667 MAP3K11Q16584 847 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 RNF43Q68DV7 783 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 PDE12Q6L8Q7 609 aaKnown RBP5.02□□□□□ -1.61
LRCH3-213ENST00000471667 TPTE2Q6XPS3 522 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 ARMC9Q7Z3E5 817 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 UBASH3BQ8TF42 649 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 RPGRQ92834 1020 aaKnown RBP5.02□□□□□ -1.61
LRCH3-213ENST00000471667 KLHDC7BQ96G42 594 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 MYRFLQ96LU7 910 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 LRFN3Q9BTN0 628 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 ADAM19Q9H013 955 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 SEC31BQ9NQW1 1179 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 IGSF5Q9NSI5 407 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 TMEM63CQ9P1W3 806 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 KANSL3Q9P2N6 904 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 BIN2Q9UBW5 565 aaPredicted RBP5.02□□□□□ -1.61
LRCH3-213ENST00000471667 ZNF652Q9Y2D9 606 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 OAS3Q9Y6K5 1087 aaKnown RBP5.02□□□□□ -1.61
LRCH3-213ENST00000471667 A0A1W2PP64 1363 aa5.02□□□□□ -1.61
LRCH3-213ENST00000471667 HMX2A2RU54 273 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 H3BRJ5 948 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 STARD3NLO95772 234 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 HOXD10P28358 340 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 IRAK1P51617 712 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 MRPS5P82675 430 aaKnown RBP5.01□□□□□ -1.61
LRCH3-213ENST00000471667 AOC3Q16853 763 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 TBC1D10BQ4KMP7 808 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-213ENST00000471667 C1orf141Q5JVX7 400 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 ZNF438Q7Z4V0 828 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 FAM20CQ8IXL6 584 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 C7orf61Q8IZ16 206 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 SH3TC2Q8TF17 1288 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 DPF2Q92785 391 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 DBNDD2Q9BQY9 259 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 RNF208Q9H0X6 261 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 GGA3Q9NZ52 723 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 CNTN3Q9P232 1028 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 THEGQ9P2T0 379 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 SEPT3Q9UH03 358 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.01□□□□□ -1.61
LRCH3-213ENST00000471667 SLX4Q8IY92 1834 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 FLT4P35916 1363 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 SBNO2Q9Y2G9 1366 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 ARFGEF2Q9Y6D5 1785 aa5.01□□□□□ -1.61
LRCH3-213ENST00000471667 BRCA2P51587 3418 aa5□□□□□ -1.61
LRCH3-213ENST00000471667 PKD1L2Q7Z442 2459 aa5□□□□□ -1.61
LRCH3-213ENST00000471667 ST20-MTHFSA0A0A6YYL1 179 aa5□□□□□ -1.61
LRCH3-213ENST00000471667 UBE2Q2LH0YL09 131 aa5□□□□□ -1.61
LRCH3-213ENST00000471667 PAX4O43316 350 aa5□□□□□ -1.61
LRCH3-213ENST00000471667 RAD17O75943 681 aa5□□□□□ -1.61
LRCH3-213ENST00000471667 RPS12P25398 132 aaKnown RBP5□□□□□ -1.61
LRCH3-213ENST00000471667 GRIK1P39086 918 aa5□□□□□ -1.61
LRCH3-213ENST00000471667 MAGEA10P43363 369 aaPredicted RBP5□□□□□ -1.61
LRCH3-213ENST00000471667 MTHFSP49914 203 aa5□□□□□ -1.61
LRCH3-213ENST00000471667 GP2P55259 537 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms