RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 C11orf49Q9H6J7 331 aa24.82■■□□□ 1.56
SREBF1-210ENST00000471445 DDX20Q9UHI6 824 aaKnown RBP24.82■■□□□ 1.56
SREBF1-210ENST00000471445 RANBP6O60518 1105 aaKnown RBP24.81■■□□□ 1.56
SREBF1-210ENST00000471445 NMT2O60551 498 aa24.81■■□□□ 1.56
SREBF1-210ENST00000471445 MSCO60682 206 aa24.81■■□□□ 1.56
SREBF1-210ENST00000471445 BMP3P12645 472 aa24.81■■□□□ 1.56
SREBF1-210ENST00000471445 MFAP1P55081 439 aaKnown RBP24.81■■□□□ 1.56
SREBF1-210ENST00000471445 SNRNP48Q6IEG0 339 aaKnown RBP24.81■■□□□ 1.56
SREBF1-210ENST00000471445 GMCL1Q96IK5 515 aa24.81■■□□□ 1.56
SREBF1-210ENST00000471445 SLC38A10Q9HBR0 1119 aa24.81■■□□□ 1.56
SREBF1-210ENST00000471445 STX8Q9UNK0 236 aa24.81■■□□□ 1.56
SREBF1-210ENST00000471445 CEP290O15078 2479 aa24.81■■□□□ 1.56
SREBF1-210ENST00000471445 PFASO15067 1338 aa24.81■■□□□ 1.56
SREBF1-210ENST00000471445 PDE4AP27815 886 aa24.8■■□□□ 1.56
SREBF1-210ENST00000471445 IRX6P78412 446 aaPredicted RBP24.8■■□□□ 1.56
SREBF1-210ENST00000471445 KCTD2Q14681 263 aa24.8■■□□□ 1.56
SREBF1-210ENST00000471445 HABP4Q5JVS0 413 aaKnown RBP24.8■■□□□ 1.56
SREBF1-210ENST00000471445 KIFC2Q96AC6 838 aa24.8■■□□□ 1.56
SREBF1-210ENST00000471445 NR2E3Q9Y5X4 410 aa24.8■■□□□ 1.56
SREBF1-210ENST00000471445 HIP1O00291 1037 aa24.79■■□□□ 1.56
SREBF1-210ENST00000471445 EVI5O60447 810 aa24.79■■□□□ 1.56
SREBF1-210ENST00000471445 COL6A1P12109 1028 aa24.79■■□□□ 1.56
SREBF1-210ENST00000471445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.79■■□□□ 1.56
SREBF1-210ENST00000471445 DIAPH3Q9NSV4 1193 aa24.79■■□□□ 1.56
SREBF1-210ENST00000471445 DIS3Q9Y2L1 958 aaKnown RBP24.79■■□□□ 1.56
SREBF1-210ENST00000471445 RIPK3Q9Y572 518 aa24.79■■□□□ 1.56
SREBF1-210ENST00000471445 ZBED4O75132 1171 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 PGK2P07205 417 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 PCP11498 1178 aaKnown RBP24.78■■□□□ 1.56
SREBF1-210ENST00000471445 CNGA1P29973 690 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 SLC1A4P43007 532 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 STAT2P52630 851 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 OAZ1P54368 228 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 HAND2P61296 217 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 ZNF792Q3KQV3 632 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 CWC27Q6UX04 472 aaKnown RBP24.78■■□□□ 1.56
SREBF1-210ENST00000471445 TBC1D10CQ8IV04 446 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 STAG1Q8WVM7 1258 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 TOMM22Q9NS69 142 aa24.78■■□□□ 1.56
SREBF1-210ENST00000471445 COLQQ9Y215 455 aaPredicted RBP24.78■■□□□ 1.56
SREBF1-210ENST00000471445 TMEM232C9JQI7 657 aa24.77■■□□□ 1.56
SREBF1-210ENST00000471445 RASGRP2Q7LDG7 609 aa24.77■■□□□ 1.56
SREBF1-210ENST00000471445 FAM160B2Q86V87 743 aa24.77■■□□□ 1.56
SREBF1-210ENST00000471445 CPXCR1Q8N123 301 aa24.77■■□□□ 1.56
SREBF1-210ENST00000471445 RAVER2Q9HCJ3 691 aaKnown RBP24.77■■□□□ 1.56
SREBF1-210ENST00000471445 MCM3APO60318 1980 aa24.76■■□□□ 1.55
SREBF1-210ENST00000471445 SMCHD1A6NHR9 2005 aa24.76■■□□□ 1.55
SREBF1-210ENST00000471445 PLA2G6O60733 806 aa24.76■■□□□ 1.55
SREBF1-210ENST00000471445 FDX1P10109 184 aa24.76■■□□□ 1.55
SREBF1-210ENST00000471445 RRP12Q5JTH9 1297 aaKnown RBP24.76■■□□□ 1.55
SREBF1-210ENST00000471445 AKNAD1Q5T1N1 836 aa24.76■■□□□ 1.55
SREBF1-210ENST00000471445 TCP11L1Q9NUJ3 509 aa24.76■■□□□ 1.55
SREBF1-210ENST00000471445 NRBP1Q9UHY1 535 aa24.76■■□□□ 1.55
SREBF1-210ENST00000471445 CTDP1Q9Y5B0 961 aaPredicted RBP24.76■■□□□ 1.55
SREBF1-210ENST00000471445 SEPT4O43236 478 aa24.75■■□□□ 1.55
SREBF1-210ENST00000471445 GSPT1P15170 499 aaKnown RBP24.75■■□□□ 1.55
SREBF1-210ENST00000471445 MCCP23508 829 aa24.75■■□□□ 1.55
SREBF1-210ENST00000471445 TTC22Q5TAA0 569 aa24.75■■□□□ 1.55
SREBF1-210ENST00000471445 CHRDL2Q6WN34 429 aa24.75■■□□□ 1.55
SREBF1-210ENST00000471445 ISY1Q9ULR0 285 aaKnown RBP24.75■■□□□ 1.55
SREBF1-210ENST00000471445 DNAJC25-GNG10A0A024R161 153 aa24.74■■□□□ 1.55
SREBF1-210ENST00000471445 KCTD1Q719H9 257 aa24.74■■□□□ 1.55
SREBF1-210ENST00000471445 CHURC1Q8WUH1 139 aa24.74■■□□□ 1.55
SREBF1-210ENST00000471445 TINF2Q9BSI4 451 aa24.74■■□□□ 1.55
SREBF1-210ENST00000471445 NEDD4P46934 1319 aa24.74■■□□□ 1.55
SREBF1-210ENST00000471445 ZNF536O15090 1300 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 DNM1LO00429 736 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 PRAMEF19Q5SWL8 479 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 RCSD1Q6JBY9 416 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 MFSD6Q6ZSS7 791 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 C7orf61Q8IZ16 206 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 CHST13Q8NET6 341 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 DCAF4Q8WV16 495 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 DSCC1Q9BVC3 393 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 PRO3102Q9H379 93 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 RNF41Q9H4P4 317 aaPredicted RBP24.73■■□□□ 1.55
SREBF1-210ENST00000471445 FBXO40Q9UH90 709 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 LCTP09848 1927 aa24.73■■□□□ 1.55
SREBF1-210ENST00000471445 LRRC37A2A6NM11 1700 aa24.72■■□□□ 1.55
SREBF1-210ENST00000471445 TOP1P11387 765 aaKnown RBP24.72■■□□□ 1.55
SREBF1-210ENST00000471445 IKQ13123 557 aaPredicted RBP24.72■■□□□ 1.55
SREBF1-210ENST00000471445 MSL3Q8N5Y2 521 aaKnown RBP24.72■■□□□ 1.55
SREBF1-210ENST00000471445 TMEM47Q9BQJ4 181 aa24.72■■□□□ 1.55
SREBF1-210ENST00000471445 IL25Q9H293 177 aa24.72■■□□□ 1.55
SREBF1-210ENST00000471445 NT5C2P49902 561 aa24.71■■□□□ 1.55
SREBF1-210ENST00000471445 CHMP4CQ96CF2 233 aa24.71■■□□□ 1.55
SREBF1-210ENST00000471445 PRR12Q9ULL5 1215 aa24.71■■□□□ 1.55
SREBF1-210ENST00000471445 RAD50Q92878 1312 aa24.7■■□□□ 1.54
SREBF1-210ENST00000471445 ZNF213O14771 459 aa24.7■■□□□ 1.54
SREBF1-210ENST00000471445 SLC4A3P48751 1232 aa24.7■■□□□ 1.54
SREBF1-210ENST00000471445 CCDC96Q2M329 555 aa24.7■■□□□ 1.54
SREBF1-210ENST00000471445 ANO1Q5XXA6 986 aa24.7■■□□□ 1.54
SREBF1-210ENST00000471445 ZNF467Q7Z7K2 595 aaPredicted RBP24.7■■□□□ 1.54
SREBF1-210ENST00000471445 DDX11Q96FC9 970 aa24.7■■□□□ 1.54
SREBF1-210ENST00000471445 RBM27Q9P2N5 1060 aaKnown RBP24.7■■□□□ 1.54
SREBF1-210ENST00000471445 MTMR7Q9Y216 660 aa24.7■■□□□ 1.54
SREBF1-210ENST00000471445 SYNGAP1Q96PV0 1343 aa24.69■■□□□ 1.54
SREBF1-210ENST00000471445 LRRC26Q2I0M4 334 aa24.69■■□□□ 1.54
SREBF1-210ENST00000471445 MAMDC4Q6UXC1 1216 aa24.69■■□□□ 1.54
SREBF1-210ENST00000471445 ESR2Q92731 530 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms