RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 TMEM87BQ96K49 555 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 PTCH2Q9Y6C5 1203 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 WDR19Q8NEZ3 1342 aa27.31■■□□□ 1.96
SUMO3-205ENST00000466861 PEX10O60683 326 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 STAT3P40763 770 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 FLT3LGP49771 235 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 KCTD1Q719H9 257 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 NBPF11Q86T75 865 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 PXYLP1Q8TE99 480 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 NUDT12Q9BQG2 462 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 TEX13BQ9BXU2 312 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 CTDP1Q9Y5B0 961 aaPredicted RBP27.3■■□□□ 1.96
SUMO3-205ENST00000466861 PLXNB2O15031 1838 aa27.3■■□□□ 1.96
SUMO3-205ENST00000466861 HMGB1P09429 215 aaKnown RBP27.29■■□□□ 1.96
SUMO3-205ENST00000466861 XRCC5P13010 732 aaKnown RBP27.29■■□□□ 1.96
SUMO3-205ENST00000466861 ANTXR2P58335 489 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 IKQ13123 557 aaPredicted RBP27.29■■□□□ 1.96
SUMO3-205ENST00000466861 WTAPQ15007 396 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 ASPRV1Q53RT3 343 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 SAMD1Q6SPF0 538 aaPredicted RBP27.29■■□□□ 1.96
SUMO3-205ENST00000466861 ABRAQ8N0Z2 381 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 SLAIN1Q8ND83 568 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 IGDCC4Q8TDY8 1250 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 ARMC5Q96C12 935 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 CWC22Q9HCG8 908 aaKnown RBP27.29■■□□□ 1.96
SUMO3-205ENST00000466861 PNMA2Q9UL42 364 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 ISY1Q9ULR0 285 aaKnown RBP27.29■■□□□ 1.96
SUMO3-205ENST00000466861 GABRQQ9UN88 632 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 IVNS1ABPQ9Y6Y0 642 aa27.29■■□□□ 1.96
SUMO3-205ENST00000466861 ZNF236Q9UL36 1845 aa27.28■■□□□ 1.96
SUMO3-205ENST00000466861 SLC15A5A6NIM6 579 aa27.28■■□□□ 1.96
SUMO3-205ENST00000466861 PTPREP23469 700 aa27.28■■□□□ 1.96
SUMO3-205ENST00000466861 PLS1Q14651 629 aa27.28■■□□□ 1.96
SUMO3-205ENST00000466861 NEK1Q96PY6 1258 aa27.28■■□□□ 1.96
SUMO3-205ENST00000466861 ECM2O94769 699 aaPredicted RBP27.27■■□□□ 1.96
SUMO3-205ENST00000466861 ERCC3P19447 782 aa27.27■■□□□ 1.96
SUMO3-205ENST00000466861 SLC9C1Q4G0N8 1177 aa27.27■■□□□ 1.96
SUMO3-205ENST00000466861 TMEM67Q5HYA8 995 aa27.27■■□□□ 1.96
SUMO3-205ENST00000466861 MORN1Q5T089 497 aa27.27■■□□□ 1.96
SUMO3-205ENST00000466861 TRMT44Q8IYL2 757 aaKnown RBP27.27■■□□□ 1.96
SUMO3-205ENST00000466861 USP6NLQ92738 828 aa27.27■■□□□ 1.96
SUMO3-205ENST00000466861 PRR12Q9ULL5 1215 aa27.27■■□□□ 1.96
SUMO3-205ENST00000466861 MTMR7Q9Y216 660 aa27.27■■□□□ 1.96
SUMO3-205ENST00000466861 PRC1O43663 620 aa27.26■■□□□ 1.95
SUMO3-205ENST00000466861 GRK4P32298 578 aa27.26■■□□□ 1.95
SUMO3-205ENST00000466861 LIFRP42702 1097 aa27.26■■□□□ 1.95
SUMO3-205ENST00000466861 GRB14Q14449 540 aa27.26■■□□□ 1.95
SUMO3-205ENST00000466861 SYDE2Q5VT97 1194 aa27.26■■□□□ 1.95
SUMO3-205ENST00000466861 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.26■■□□□ 1.95
SUMO3-205ENST00000466861 RGS2P41220 211 aa27.25■■□□□ 1.95
SUMO3-205ENST00000466861 MAP2K5Q13163 448 aa27.25■■□□□ 1.95
SUMO3-205ENST00000466861 TKFCQ3LXA3 575 aa27.25■■□□□ 1.95
SUMO3-205ENST00000466861 NCAPG2Q86XI2 1143 aa27.25■■□□□ 1.95
SUMO3-205ENST00000466861 RASEFQ8IZ41 740 aa27.25■■□□□ 1.95
SUMO3-205ENST00000466861 MAP3K14Q99558 947 aa27.25■■□□□ 1.95
SUMO3-205ENST00000466861 USP26Q9BXU7 913 aa27.25■■□□□ 1.95
SUMO3-205ENST00000466861 ZNFX1Q9P2E3 1918 aaKnown RBP27.24■■□□□ 1.95
SUMO3-205ENST00000466861 FRMPD2Q68DX3 1309 aaPredicted RBP27.24■■□□□ 1.95
SUMO3-205ENST00000466861 ADCY3O60266 1144 aa27.24■■□□□ 1.95
SUMO3-205ENST00000466861 HOXC6P09630 235 aa27.24■■□□□ 1.95
SUMO3-205ENST00000466861 PARP1P09874 1014 aaKnown RBP27.24■■□□□ 1.95
SUMO3-205ENST00000466861 DHX32Q7L7V1 743 aaKnown RBP27.24■■□□□ 1.95
SUMO3-205ENST00000466861 RASGRP2Q7LDG7 609 aa27.24■■□□□ 1.95
SUMO3-205ENST00000466861 RANBP17Q9H2T7 1088 aaKnown RBP27.24■■□□□ 1.95
SUMO3-205ENST00000466861 GPCPD1Q9NPB8 672 aa27.24■■□□□ 1.95
SUMO3-205ENST00000466861 FBXO40Q9UH90 709 aa27.24■■□□□ 1.95
SUMO3-205ENST00000466861 WDR78Q5VTH9 848 aa27.23■■□□□ 1.95
SUMO3-205ENST00000466861 SNRNP48Q6IEG0 339 aaKnown RBP27.23■■□□□ 1.95
SUMO3-205ENST00000466861 TTBK2Q6IQ55 1244 aa27.23■■□□□ 1.95
SUMO3-205ENST00000466861 CHST3Q7LGC8 479 aa27.23■■□□□ 1.95
SUMO3-205ENST00000466861 CATIPQ7Z7H3 387 aa27.23■■□□□ 1.95
SUMO3-205ENST00000466861 CHST13Q8NET6 341 aa27.23■■□□□ 1.95
SUMO3-205ENST00000466861 LY9Q9HBG7 655 aa27.23■■□□□ 1.95
SUMO3-205ENST00000466861 SH2B2O14492 632 aaPredicted RBP27.22■■□□□ 1.95
SUMO3-205ENST00000466861 FCER1AP12319 257 aa27.22■■□□□ 1.95
SUMO3-205ENST00000466861 IFFO2Q5TF58 517 aa27.22■■□□□ 1.95
SUMO3-205ENST00000466861 CPXCR1Q8N123 301 aa27.22■■□□□ 1.95
SUMO3-205ENST00000466861 ZNF333Q96JL9 665 aa27.22■■□□□ 1.95
SUMO3-205ENST00000466861 APBA2Q99767 749 aa27.22■■□□□ 1.95
SUMO3-205ENST00000466861 SLC5A4Q9NY91 659 aa27.22■■□□□ 1.95
SUMO3-205ENST00000466861 SNX14Q9Y5W7 946 aa27.22■■□□□ 1.95
SUMO3-205ENST00000466861 DDAH1O94760 285 aa27.21■■□□□ 1.95
SUMO3-205ENST00000466861 PSMA5P28066 241 aa27.21■■□□□ 1.95
SUMO3-205ENST00000466861 EXOSC10Q01780 885 aaKnown RBP27.21■■□□□ 1.95
SUMO3-205ENST00000466861 TROAPQ12815 778 aa27.21■■□□□ 1.95
SUMO3-205ENST00000466861 SGMS1Q86VZ5 419 aa27.21■■□□□ 1.95
SUMO3-205ENST00000466861 RAVER2Q9HCJ3 691 aaKnown RBP27.21■■□□□ 1.95
SUMO3-205ENST00000466861 ZNF536O15090 1300 aa27.2■■□□□ 1.95
SUMO3-205ENST00000466861 ICAM1P05362 532 aa27.2■■□□□ 1.94
SUMO3-205ENST00000466861 SLC16A2P36021 539 aa27.2■■□□□ 1.94
SUMO3-205ENST00000466861 UBXN2AP68543 259 aa27.2■■□□□ 1.94
SUMO3-205ENST00000466861 GRM4Q14833 912 aa27.2■■□□□ 1.94
SUMO3-205ENST00000466861 ADCK5Q3MIX3 580 aa27.2■■□□□ 1.94
SUMO3-205ENST00000466861 CHMP4CQ96CF2 233 aa27.2■■□□□ 1.94
SUMO3-205ENST00000466861 PALM3A6NDB9 673 aaPredicted RBP27.19■■□□□ 1.94
SUMO3-205ENST00000466861 ADORA2AP29274 412 aa27.19■■□□□ 1.94
SUMO3-205ENST00000466861 KCTD2Q14681 263 aa27.19■■□□□ 1.94
SUMO3-205ENST00000466861 GOLGA8HP0CJ92 632 aa27.18■■□□□ 1.94
SUMO3-205ENST00000466861 CALM1P0DP23 149 aa27.18■■□□□ 1.94
SUMO3-205ENST00000466861 CALM2P0DP24 149 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms