RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 WDR44Q5JSH3 913 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 DACT2Q5SW24 774 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 AKNAD1Q5T1N1 836 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 STRIP1Q5VSL9 837 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 MORC1Q86VD1 984 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 CYP4X1Q8N118 509 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 IFT43Q96FT9 208 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 ZBED3Q96IU2 234 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 TSEN34Q9BSV6 310 aaKnown RBP5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 ZNF395Q9H8N7 513 aaPredicted RBP5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 KLK14Q9P0G3 267 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 GABRQQ9UN88 632 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 POLIQ9UNA4 740 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 RLFQ13129 1914 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 GBF1Q92538 1859 aa5.28□□□□□ -1.56
ECHDC1-211ENST00000460558 CFAP54Q96N23 3096 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 DLG5Q8TDM6 1919 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 TTC24A2A3L6 582 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 TGFBR3LH3BV60 316 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 LDHBP07195 334 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 SF3B3Q15393 1217 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 TMEM214Q6NUQ4 689 aaKnown RBP5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 DNAH12Q6ZR08 3092 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 NLRP10Q86W26 655 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 ERO1BQ86YB8 467 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 KIAA0825Q8IV33 1275 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 ZBTB38Q8NAP3 1195 aaPredicted RBP5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 MXD3Q9BW11 206 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 VEZTQ9HBM0 779 aa5.27□□□□□ -1.57
ECHDC1-211ENST00000460558 COL3A1P02461 1466 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 XDHP47989 1333 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 ZFHX2Q9C0A1 2572 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 CLRN2A0PK11 232 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 FAM86C2PA6NEL3 165 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 PDHXO00330 501 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 TNPO2O14787 897 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 HMGCRP04035 888 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 BMP1P13497 986 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 ATP4AP20648 1035 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 DAB2P98082 770 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 TNFAIP1Q13829 316 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 PDE3AQ14432 1141 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 RASA3Q14644 834 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 HIF1AQ16665 826 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 LRRC26Q2I0M4 334 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 GNASQ5JWF2 1037 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 C9orf50Q5SZB4 431 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 ANKRD23Q86SG2 305 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 TREML1Q86YW5 311 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 LINC00528Q8N1L1 170 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 FBF1Q8TES7 1133 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 RTF1Q92541 710 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 EDEM1Q92611 657 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 HPS1Q92902 700 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 INSM2Q96T92 566 aaPredicted RBP5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 PARK7Q99497 189 aaKnown RBP5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 BACH2Q9BYV9 841 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 BCL11AQ9H165 835 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 KCNH6Q9H252 994 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 C11orf16Q9NQ32 467 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 PLA2G2EQ9NZK7 142 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 PARP2Q9UGN5 583 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 OGDHLQ9ULD0 1010 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 ACACBO00763 2458 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 MED23Q9ULK4 1368 aa5.26□□□□□ -1.57
ECHDC1-211ENST00000460558 PLXNB2O15031 1838 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 PRR33A8MZF0 331 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 OPLAHO14841 1288 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 DIAPH1O60610 1272 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 RPLP1P05386 114 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 U2AF1L5P0DN76 240 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 BCRP11274 1271 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 COL6A1P12109 1028 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 PLA2G4AP47712 749 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 U2AF1Q01081 240 aaKnown RBP eCLIP5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 PPIL2Q13356 520 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 AAMPQ13685 434 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 TTLL5Q6EMB2 1281 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 ALG1LQ6GMV1 187 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 XKR5Q6UX68 686 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 RNF217Q8TC41 542 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 COA7Q96BR5 231 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 DUSP9Q99956 384 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 ZNF576Q9H609 170 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 FAM13BQ9NYF5 915 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 KCNH4Q9UQ05 1017 aa5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 KMT2BQ9UMN6 2715 aaPredicted RBP5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 FASNP49327 2511 aaKnown RBP5.25□□□□□ -1.57
ECHDC1-211ENST00000460558 SCAMP3O14828 347 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 MICAL2O94851 1124 aa5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 CTSOP43234 321 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 MAPK8P45983 427 aa5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 DNM1Q05193 864 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 CCDC85BQ15834 202 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 SUSD3Q96L08 255 aa5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 RNPC3Q96LT9 517 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-211ENST00000460558 UIMC1Q96RL1 719 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms