RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 TINF2Q9BSI4 451 aa22.03■■□□□ 1.12
UBE2D4-208ENST00000454350 SLC38A10Q9HBR0 1119 aa22.03■■□□□ 1.12
UBE2D4-208ENST00000454350 TSPY3P0CV98 308 aa22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 TSPY8P0CW00 308 aa22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 TAL1P17542 331 aaPredicted RBP22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 KCTD2Q14681 263 aa22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 SNRNP48Q6IEG0 339 aaKnown RBP22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 IL17RBQ9NRM6 502 aa22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 NRBP1Q9UHY1 535 aa22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 ANAPC4Q9UJX5 808 aa22.02■■□□□ 1.12
UBE2D4-208ENST00000454350 ZNF865P0CJ78 1059 aaPredicted RBP22.01■■□□□ 1.11
UBE2D4-208ENST00000454350 CTDSPL2Q05D32 466 aa22.01■■□□□ 1.11
UBE2D4-208ENST00000454350 SMC5Q8IY18 1101 aa22.01■■□□□ 1.11
UBE2D4-208ENST00000454350 ARRDC4Q8NCT1 418 aa22.01■■□□□ 1.11
UBE2D4-208ENST00000454350 LRCH3Q96II8 777 aa22.01■■□□□ 1.11
UBE2D4-208ENST00000454350 FAM227BQ96M60 508 aa22.01■■□□□ 1.11
UBE2D4-208ENST00000454350 FEM1BQ9UK73 627 aa22.01■■□□□ 1.11
UBE2D4-208ENST00000454350 LCTP09848 1927 aa22.01■■□□□ 1.11
UBE2D4-208ENST00000454350 A0A0D9SFI3 127 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 FGRP09769 529 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 NOVP48745 357 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 ATN1P54259 1190 aaPredicted RBP22■■□□□ 1.11
UBE2D4-208ENST00000454350 LRRC41Q15345 812 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 ALX1Q15699 326 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 SLFN13Q68D06 897 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 KIFC2Q96AC6 838 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 FGD4Q96M96 766 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 RAVER2Q9HCJ3 691 aaKnown RBP22■■□□□ 1.11
UBE2D4-208ENST00000454350 HELLSQ9NRZ9 838 aa22■■□□□ 1.11
UBE2D4-208ENST00000454350 SLC3A2P08195 630 aaKnown RBP21.99■■□□□ 1.11
UBE2D4-208ENST00000454350 BMP3P12645 472 aa21.99■■□□□ 1.11
UBE2D4-208ENST00000454350 SNX17Q15036 470 aa21.99■■□□□ 1.11
UBE2D4-208ENST00000454350 CPXCR1Q8N123 301 aa21.99■■□□□ 1.11
UBE2D4-208ENST00000454350 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
UBE2D4-208ENST00000454350 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
UBE2D4-208ENST00000454350 NMT2O60551 498 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 ZBED4O75132 1171 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 SNAI1O95863 264 aaPredicted RBP21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 RTP1P59025 263 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 AAMPQ13685 434 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 MAMDC4Q6UXC1 1216 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 SLC39A5Q6ZMH5 540 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 RASGRP2Q7LDG7 609 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 TICAM2Q86XR7 235 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 GMCL1Q96IK5 515 aa21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 ZBTB47Q9UFB7 747 aaPredicted RBP21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 LAMA2P24043 3122 aaKnown RBP21.98■■□□□ 1.11
UBE2D4-208ENST00000454350 COL6A3P12111 3177 aa21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 LAMA4Q16363 1823 aa21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 ORC4O43929 436 aa21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 IGHDP01880 384 aa21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 OAZ1P54368 228 aa21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 ZNF589Q86UQ0 364 aaPredicted RBP21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 TDHQ8IZJ6 230 aa21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 MSL3Q8N5Y2 521 aaKnown RBP21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 ZNF536O15090 1300 aa21.97■■□□□ 1.11
UBE2D4-208ENST00000454350 KBTBD13C9JR72 458 aa21.96■■□□□ 1.11
UBE2D4-208ENST00000454350 FGAP02671 866 aa21.96■■□□□ 1.11
UBE2D4-208ENST00000454350 ADCYAP1R1P41586 468 aa21.96■■□□□ 1.11
UBE2D4-208ENST00000454350 MDM2Q00987 491 aaPredicted RBP21.96■■□□□ 1.11
UBE2D4-208ENST00000454350 LRIT3Q3SXY7 679 aa21.96■■□□□ 1.11
UBE2D4-208ENST00000454350 MCMDC2Q4G0Z9 681 aa21.96■■□□□ 1.11
UBE2D4-208ENST00000454350 LENG1Q96BZ8 264 aaPredicted RBP21.96■■□□□ 1.11
UBE2D4-208ENST00000454350 LRRC37A2A6NM11 1700 aa21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 TMEM232C9JQI7 657 aa21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 PLA2G6O60733 806 aa21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 MCCP23508 829 aa21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 NMIQ13287 307 aaPredicted RBP21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 ZNF467Q7Z7K2 595 aaPredicted RBP21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 STAG1Q8WVM7 1258 aa21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 UBE2OQ9C0C9 1292 aaKnown RBP21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 XPNPEP3Q9NQH7 507 aa21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 PHF24Q9UPV7 400 aa21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 SYNGAP1Q96PV0 1343 aa21.95■■□□□ 1.1
UBE2D4-208ENST00000454350 TSPY2A6NKD2 308 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 ADAMTS4O75173 837 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 PGK1P00558 417 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 HSPD1P10809 573 aaKnown RBP21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 RARBP10826 455 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 STAT2P52630 851 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 C1orf53Q5VUE5 145 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 PLEKHM2Q8IWE5 1019 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 CHST13Q8NET6 341 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 EXOC6Q8TAG9 804 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 CHMP4CQ96CF2 233 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 DDX11Q96FC9 970 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 ZMYM6O95789 1325 aa21.94■■□□□ 1.1
UBE2D4-208ENST00000454350 FDX1P10109 184 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 AKR1A1P14550 325 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 SLC4A3P48751 1232 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 NUCB1Q02818 461 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 TRIM60Q495X7 471 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 B4GALNT3Q6L9W6 998 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 FAM160B2Q86V87 743 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 FERMT2Q96AC1 680 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 OSBPL3Q9H4L5 887 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 STX8Q9UNK0 236 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 ATP11BQ9Y2G3 1177 aa21.93■■□□□ 1.1
UBE2D4-208ENST00000454350 ADCY6O43306 1168 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 410 ms