RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 DHX32Q7L7V1 743 aaKnown RBP32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 MOV10L1Q9BXT6 1211 aaKnown RBP32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 SLC38A10Q9HBR0 1119 aa32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 GPCPD1Q9NPB8 672 aa32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 GPHNQ9NQX3 736 aaPredicted RBP32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 SRRDQ9UH36 339 aa32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 ZNF214Q9UL59 606 aaPredicted RBP32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 PTPN22Q9Y2R2 807 aa32.76■■■□□ 2.83
SMARCC1-203ENST00000454240 PLXNB2O15031 1838 aa32.75■■■□□ 2.83
SMARCC1-203ENST00000454240 SH2B2O14492 632 aaPredicted RBP32.75■■■□□ 2.83
SMARCC1-203ENST00000454240 SEC24BO95487 1268 aa32.75■■■□□ 2.83
SMARCC1-203ENST00000454240 PRMT2P55345 433 aa32.75■■■□□ 2.83
SMARCC1-203ENST00000454240 IKQ13123 557 aaPredicted RBP32.75■■■□□ 2.83
SMARCC1-203ENST00000454240 GPATCH4Q5T3I0 446 aaKnown RBP32.75■■■□□ 2.83
SMARCC1-203ENST00000454240 PRR12Q9ULL5 1215 aa32.75■■■□□ 2.83
SMARCC1-203ENST00000454240 ZBED4O75132 1171 aa32.74■■■□□ 2.83
SMARCC1-203ENST00000454240 LIFRP42702 1097 aa32.74■■■□□ 2.83
SMARCC1-203ENST00000454240 FBXO46Q6PJ61 603 aaPredicted RBP32.74■■■□□ 2.83
SMARCC1-203ENST00000454240 TMTC2Q8N394 836 aa32.74■■■□□ 2.83
SMARCC1-203ENST00000454240 COA7Q96BR5 231 aa32.74■■■□□ 2.83
SMARCC1-203ENST00000454240 JAKMIP1Q96N16 626 aaKnown RBP32.74■■■□□ 2.83
SMARCC1-203ENST00000454240 ATP2A1O14983 1001 aa32.73■■■□□ 2.83
SMARCC1-203ENST00000454240 PLS1Q14651 629 aa32.73■■■□□ 2.83
SMARCC1-203ENST00000454240 SHCBP1Q8NEM2 672 aa32.73■■■□□ 2.83
SMARCC1-203ENST00000454240 GOLGA8HP0CJ92 632 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 SLC16A2P36021 539 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 STAT3P40763 770 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 TROAPQ12815 778 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 ASPRV1Q53RT3 343 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 GPR142Q7Z601 462 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 RIOX2Q8IUF8 465 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 CCAR1Q8IX12 1150 aaKnown RBP32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 LRRC2Q9BYS8 371 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 GABRQQ9UN88 632 aa32.72■■■□□ 2.83
SMARCC1-203ENST00000454240 PRKCZQ05513 592 aa32.71■■■□□ 2.83
SMARCC1-203ENST00000454240 SYDE2Q5VT97 1194 aa32.71■■■□□ 2.83
SMARCC1-203ENST00000454240 GJD2Q9UKL4 321 aa32.71■■■□□ 2.83
SMARCC1-203ENST00000454240 SLC25A27O95847 323 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 PARP1P09874 1014 aaKnown RBP32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 ERCC3P19447 782 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 PSMA5P28066 241 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 OAZ1P54368 228 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 PLEKHH3Q7Z736 793 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 CATIPQ7Z7H3 387 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 TNS4Q8IZW8 715 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 TCEANC2Q96MN5 208 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 TEX13BQ9BXU2 312 aa32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 CTDP1Q9Y5B0 961 aaPredicted RBP32.7■■■□□ 2.83
SMARCC1-203ENST00000454240 HTTP42858 3142 aa32.69■■■□□ 2.82
SMARCC1-203ENST00000454240 CPA1P15085 419 aa32.69■■■□□ 2.82
SMARCC1-203ENST00000454240 BLOC1S2Q6QNY1 142 aa32.69■■■□□ 2.82
SMARCC1-203ENST00000454240 MROH8Q9H579 483 aa32.69■■■□□ 2.82
SMARCC1-203ENST00000454240 ZNFX1Q9P2E3 1918 aaKnown RBP32.69■■■□□ 2.82
SMARCC1-203ENST00000454240 PALM3A6NDB9 673 aaPredicted RBP32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 FLT3LGP49771 235 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 GRM4Q14833 912 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 SGMS1Q86VZ5 419 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 ZNF654Q8IZM8 581 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 CPXCR1Q8N123 301 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 STAG2Q8N3U4 1231 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 RANBP17Q9H2T7 1088 aaKnown RBP32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 RAVER2Q9HCJ3 691 aaKnown RBP32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 MAD2L2Q9UI95 211 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 PTCH2Q9Y6C5 1203 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 ZNF536O15090 1300 aa32.68■■■□□ 2.82
SMARCC1-203ENST00000454240 CCDC69A6NI79 296 aa32.67■■■□□ 2.82
SMARCC1-203ENST00000454240 WDR78Q5VTH9 848 aa32.67■■■□□ 2.82
SMARCC1-203ENST00000454240 SNRNP48Q6IEG0 339 aaKnown RBP32.67■■■□□ 2.82
SMARCC1-203ENST00000454240 NCAPG2Q86XI2 1143 aa32.67■■■□□ 2.82
SMARCC1-203ENST00000454240 MAP3K14Q99558 947 aa32.67■■■□□ 2.82
SMARCC1-203ENST00000454240 TM6SF1Q9BZW5 370 aa32.67■■■□□ 2.82
SMARCC1-203ENST00000454240 UBA5Q9GZZ9 404 aa32.67■■■□□ 2.82
SMARCC1-203ENST00000454240 DDAH1O94760 285 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 CASTP20810 708 aaKnown RBP32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 RPS6KB1P23443 525 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 PTPREP23469 700 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 COPB2P35606 906 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 SNAP25P60880 206 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 IRF5Q13568 498 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 MORN1Q5T089 497 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 NFXL1Q6ZNB6 911 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 CPVLQ9H3G5 476 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 CWC22Q9HCG8 908 aaKnown RBP32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 ZSWIM6Q9HCJ5 1215 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 RIPK3Q9Y572 518 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 SMCHD1A6NHR9 2005 aa32.66■■■□□ 2.82
SMARCC1-203ENST00000454240 SOCS4Q8WXH5 440 aa32.65■■■□□ 2.82
SMARCC1-203ENST00000454240 USP6NLQ92738 828 aa32.65■■■□□ 2.82
SMARCC1-203ENST00000454240 NUDT12Q9BQG2 462 aa32.65■■■□□ 2.82
SMARCC1-203ENST00000454240 KLRF2D3W0D1 207 aa32.64■■■□□ 2.82
SMARCC1-203ENST00000454240 STRNO43815 780 aa32.64■■■□□ 2.82
SMARCC1-203ENST00000454240 ANAPC15P60006 121 aa32.64■■■□□ 2.82
SMARCC1-203ENST00000454240 FBXL16Q8N461 479 aa32.64■■■□□ 2.82
SMARCC1-203ENST00000454240 RAET1EQ8TD07 263 aa32.64■■■□□ 2.82
SMARCC1-203ENST00000454240 ZNF236Q9UL36 1845 aa32.64■■■□□ 2.82
SMARCC1-203ENST00000454240 HPS5Q9UPZ3 1129 aa32.64■■■□□ 2.82
SMARCC1-203ENST00000454240 IVNS1ABPQ9Y6Y0 642 aa32.64■■■□□ 2.82
SMARCC1-203ENST00000454240 MYH6P13533 1939 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 SLC15A5A6NIM6 579 aa32.63■■■□□ 2.81
SMARCC1-203ENST00000454240 GRB14Q14449 540 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms