RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 ATE1O95260 518 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 CT47B1P0C2W7 299 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 ARNTP27540 789 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 PCBP4P57723 403 aaKnown RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 MLLT1Q03111 559 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 PCDH1Q08174 1060 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 DDR1Q08345 913 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZNF252P-AS1Q0IIN9 211 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 SQSTM1Q13501 440 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 PPP2R5AQ15172 486 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 FXNQ16595 210 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 SCARA3Q6AZY7 606 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 LLGL2Q6P1M3 1020 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 ADAMTSL4Q6UY14 1074 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 LEKR1Q6ZMV7 388 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 VN1R5Q7Z5H4 357 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 ALYREFQ86V81 257 aaKnown RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 SULF2Q8IWU5 870 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 RPUSD2Q8IZ73 545 aaKnown RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 NME8Q8N427 588 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 GRIN3AQ8TCU5 1115 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 EXOC4Q96A65 974 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 MAF1Q9H063 256 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 SUDS3Q9H7L9 328 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 USP25Q9UHP3 1055 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 SOX13Q9UN79 622 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 POLR3KQ9Y2Y1 108 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 PCDHB14Q9Y5E9 798 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 FHOD1Q9Y613 1164 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 RTL1A6NKG5 1358 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 GPRASP1Q5JY77 1395 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 KIF15Q9NS87 1388 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 GRIN2AQ12879 1464 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 RPRD2Q5VT52 1461 aaKnown RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 CFAP74Q9C0B2 1584 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 PPRC1Q5VV67 1664 aaKnown RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 CDC42BPAQ5VT25 1732 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 TOP2BQ02880 1626 aa4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 SOS1Q07889 1333 aaPredicted RBP4.21□□□□□ -1.74
HMGB3P8-201ENST00000449709 AQRO60306 1485 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 GOLGA6CA6NDK9 693 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 GOLGA6BA6NDN3 693 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 TRIM37O94972 964 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 BAG4O95429 457 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 GJB6O95452 261 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 BPNT1O95861 308 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 GHRHP01286 108 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 IVLP07476 585 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 GOLGA6DP0CG33 693 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 MYBL2P10244 700 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 ADH6P28332 368 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 ABCD1P33897 745 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 CHRNA4P43681 627 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 RPS6KA3P51812 740 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 RBM5P52756 815 aaKnown RBP eCLIP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 AMPD3Q01432 767 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 RPL6Q02878 288 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 PTPN11Q06124 597 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 CRYMQ14894 314 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZRSR2Q15696 482 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 PCSK7Q16549 785 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 C2orf27AQ580R0 203 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 HSP90B2PQ58FF3 399 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 LARP1BQ659C4 914 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 CEP135Q66GS9 1140 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 SPTY2D1Q68D10 685 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 WWC2Q6AWC2 1192 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 ISM2Q6H9L7 571 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 CAVIN1Q6NZI2 390 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 C16orf86Q6ZW13 317 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 CHSY3Q70JA7 882 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 CCDC186Q7Z3E2 898 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 PDZD3Q86UT5 571 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 CD163Q86VB7 1156 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 FMNL3Q8IVF7 1028 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 REXO1L1PQ8IX06 675 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 TEX11Q8IYF3 940 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 C10orf67Q8IYJ2 551 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 TRMT2AQ8IZ69 625 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 CACTIN-AS1Q8N1I8 211 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 C19orf47Q8N9M1 422 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 ZNF483Q8TF39 744 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 THAP3Q8WTV1 239 aaPredicted RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 SH3GL3Q99963 347 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 LZTS2Q9BRK4 669 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 EMILIN2Q9BXX0 1053 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 ADAM19Q9H013 955 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 DNAJB12Q9NXW2 375 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 GOLGA6AQ9NYA3 693 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 LEMD3Q9Y2U8 911 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 EFCAB5A4FU69 1503 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 FHOD3Q2V2M9 1422 aa4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 ATXN2Q99700 1313 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 MYBBP1AQ9BQG0 1328 aaKnown RBP4.2□□□□□ -1.74
HMGB3P8-201ENST00000449709 TCOF1Q13428 1488 aaKnown RBP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 A0A1W2PQH9 124 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 ERICH4A6NGS2 130 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 PDLIM1O00151 329 aa4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 SMNDC1O75940 238 aaKnown RBP eCLIP4.19□□□□□ -1.74
HMGB3P8-201ENST00000449709 SMC2O95347 1197 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms