RNA–Protein interactions for RNA: ENST00000446921.6

SIK3-205, Transcript of SIK family kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIK3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-205ENST00000446921 NLRP3Q96P20 1036 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 CDK19Q9BWU1 502 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 CTNND1O60716 968 aaKnown RBP17.56■□□□□ 0.4
SIK3-205ENST00000446921 CCDC38Q502W7 563 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 RASIP1Q5U651 963 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 UBAC1Q9BSL1 405 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 PAIP2BQ9ULR5 123 aaKnown RBP17.56■□□□□ 0.4
SIK3-205ENST00000446921 MAPK8IP1Q9UQF2 711 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 DPPA5A6NC42 116 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 HEXIM1O94992 359 aaKnown RBP17.56■□□□□ 0.4
SIK3-205ENST00000446921 GYPCP04921 128 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 CTNNA1P35221 906 aaKnown RBP17.56■□□□□ 0.4
SIK3-205ENST00000446921 ZBED6P86452 979 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 SHC4Q6S5L8 630 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 DDX46Q7L014 1031 aaKnown RBP17.56■□□□□ 0.4
SIK3-205ENST00000446921 STAMQ92783 540 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 ARHGEF1Q92888 912 aaKnown RBP17.56■□□□□ 0.4
SIK3-205ENST00000446921 VCXQ9H320 206 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 CD2APQ9Y5K6 639 aa17.56■□□□□ 0.4
SIK3-205ENST00000446921 MGRN1O60291 552 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 MAGEA10P43363 369 aaPredicted RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 PPP1R15BQ5SWA1 713 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 GGT6Q6P531 493 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 ALG1Q9BT22 464 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 DNAAF2Q9NVR5 837 aaKnown RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 ATP2A2P16615 1042 aaKnown RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 PDIA3P30101 505 aaKnown RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 CARSP49589 748 aaKnown RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 RALYLQ86SE5 291 aaKnown RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 SPICE1Q8N0Z3 855 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 LINGO3P0C6S8 592 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 TRIM21P19474 475 aaKnown RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 XRCC4Q13426 336 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 KRT71Q3SY84 523 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 TRIML1Q8N9V2 468 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 SPATA4Q8NEY3 305 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 ELAC2Q9BQ52 826 aaKnown RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 LZTS2Q9BRK4 669 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 PIDD1Q9HB75 910 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 GPHNQ9NQX3 736 aaPredicted RBP17.55■□□□□ 0.4
SIK3-205ENST00000446921 DLGAP2Q9P1A6 1054 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 CTNND2Q9UQB3 1225 aa17.55■□□□□ 0.4
SIK3-205ENST00000446921 CETN3O15182 167 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 ZSCAN9O15535 394 aaPredicted RBP17.54■□□□□ 0.4
SIK3-205ENST00000446921 DIXDC1Q155Q3 683 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 EFCAB2Q5VUJ9 269 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 TMEM154Q6P9G4 183 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 TMOD4Q9NZQ9 345 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 ZMYM6O95789 1325 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 LRRC7Q96NW7 1537 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 A0A1B0GTH6 734 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 RNF8O76064 485 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 HNRNPCP07910 306 aaKnown RBP eCLIP17.54■□□□□ 0.45e-7■■■■□ 20.8
SIK3-205ENST00000446921 RXRAP19793 462 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 KLHL7Q8IXQ5 586 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 ANKRD13CQ8N6S4 541 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 SMCR8Q8TEV9 937 aaPredicted RBP17.54■□□□□ 0.4
SIK3-205ENST00000446921 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 TCHPQ9BT92 498 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 BZW2Q9Y6E2 419 aaKnown RBP17.54■□□□□ 0.4
SIK3-205ENST00000446921 PI4KAP2A4QPH2 592 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 ANKRD20A2Q5SQ80 823 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 ANKRD20A1Q5TYW2 823 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 ANKRD20A3Q5VUR7 823 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 PI4KAP1Q8N8J0 262 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 NAF1Q96HR8 494 aaKnown RBP17.54■□□□□ 0.4
SIK3-205ENST00000446921 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
SIK3-205ENST00000446921 SESN3P58005 492 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 CCDC15Q0P6D6 951 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 CCT8L1PA6NM43 557 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 IFNAR2P48551 515 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 PLCD1P51178 756 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 DYNC1I2Q13409 638 aaKnown RBP17.53■□□□□ 0.4
SIK3-205ENST00000446921 BLMHQ13867 455 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 SPATA1Q5VX52 437 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 ERICH1Q86X53 443 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 TRIM11Q96F44 468 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 FGD4Q96M96 766 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 ZNF233A6NK53 670 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 CASP1P29466 404 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 SAFBQ15424 915 aaKnown RBP eCLIP17.53■□□□□ 0.48e-6■□□□□ 10.3
SIK3-205ENST00000446921 RRAGBQ5VZM2 374 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 ZNF365Q70YC5 407 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 GET4Q7L5D6 327 aaPredicted RBP17.53■□□□□ 0.4
SIK3-205ENST00000446921 AIFM3Q96NN9 605 aa17.53■□□□□ 0.4
SIK3-205ENST00000446921 CHGBP05060 677 aa17.52■□□□□ 0.4
SIK3-205ENST00000446921 GCLCP48506 637 aaPredicted RBP17.52■□□□□ 0.4
SIK3-205ENST00000446921 PPP4R3AQ6IN85 833 aa17.52■□□□□ 0.4
SIK3-205ENST00000446921 KRI1Q8N9T8 703 aaKnown RBP17.52■□□□□ 0.4
SIK3-205ENST00000446921 GBP5Q96PP8 586 aa17.52■□□□□ 0.4
SIK3-205ENST00000446921 HELLSQ9NRZ9 838 aa17.52■□□□□ 0.4
SIK3-205ENST00000446921 TLR7Q9NYK1 1049 aaKnown RBP17.52■□□□□ 0.4
SIK3-205ENST00000446921 CROCC2H7BZ55 1655 aa17.52■□□□□ 0.4
SIK3-205ENST00000446921 KIF28PB7ZC32 967 aa17.52■□□□□ 0.4
SIK3-205ENST00000446921 H0Y3Z8 333 aa17.52■□□□□ 0.4
SIK3-205ENST00000446921 BMP6P22004 513 aa17.52■□□□□ 0.4
SIK3-205ENST00000446921 SFSWAPQ12872 951 aaKnown RBP17.52■□□□□ 0.4
SIK3-205ENST00000446921 GLE1Q53GS7 698 aaKnown RBP17.52■□□□□ 0.4
SIK3-205ENST00000446921 RUFY4Q6ZNE9 571 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms