RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 SLFN13Q68D06 897 aa14.18□□□□□ -0.14
PDGFB-203ENST00000440375 PRPF38AQ8NAV1 312 aaKnown RBP14.18□□□□□ -0.14
PDGFB-203ENST00000440375 RWDD1Q9H446 243 aaPredicted RBP14.18□□□□□ -0.14
PDGFB-203ENST00000440375 RAVER2Q9HCJ3 691 aaKnown RBP14.18□□□□□ -0.14
PDGFB-203ENST00000440375 IL17RBQ9NRM6 502 aa14.18□□□□□ -0.14
PDGFB-203ENST00000440375 HELLSQ9NRZ9 838 aa14.18□□□□□ -0.14
PDGFB-203ENST00000440375 SYNPO2Q9UMS6 1093 aa14.18□□□□□ -0.14
PDGFB-203ENST00000440375 TSPY2A6NKD2 308 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 TRIM6-TRIM34B2RNG4 842 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 SEPT4O43236 478 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 TAL1P17542 331 aaPredicted RBP14.17□□□□□ -0.14
PDGFB-203ENST00000440375 SLC4A3P48751 1232 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 NUCB1Q02818 461 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 AAMPQ13685 434 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 GJC2Q5T442 439 aaPredicted RBP14.17□□□□□ -0.14
PDGFB-203ENST00000440375 CHD1LQ86WJ1 897 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 PLEKHM2Q8IWE5 1019 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 CPXCR1Q8N123 301 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 LENG1Q96BZ8 264 aaPredicted RBP14.17□□□□□ -0.14
PDGFB-203ENST00000440375 GDF15Q99988 308 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 SENP6Q9GZR1 1112 aaPredicted RBP14.17□□□□□ -0.14
PDGFB-203ENST00000440375 SLC38A10Q9HBR0 1119 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 SLC5A4Q9NY91 659 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 ANAPC4Q9UJX5 808 aa14.17□□□□□ -0.14
PDGFB-203ENST00000440375 DNM1LO00429 736 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 ATP2A1O14983 1001 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 FGAP02671 866 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 BMP3P12645 472 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 COPB2P35606 906 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 MAGEA10P43363 369 aaPredicted RBP14.16□□□□□ -0.14
PDGFB-203ENST00000440375 ATN1P54259 1190 aaPredicted RBP14.16□□□□□ -0.14
PDGFB-203ENST00000440375 ALX1Q15699 326 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 MCMDC2Q4G0Z9 681 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 RILPL2Q969X0 211 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 FEM1BQ9UK73 627 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
PDGFB-203ENST00000440375 STX8Q9UNK0 236 aa14.16□□□□□ -0.14
PDGFB-203ENST00000440375 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 PLXNA1Q9UIW2 1896 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 DNAJC25-GNG10A0A024R161 153 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 TMEM232C9JQI7 657 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 SOX1O00570 391 aaPredicted RBP14.15□□□□□ -0.14
PDGFB-203ENST00000440375 ORC4O43929 436 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 RANBP6O60518 1105 aaKnown RBP14.15□□□□□ -0.14
PDGFB-203ENST00000440375 ZBED4O75132 1171 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 MYCNP04198 464 aaPredicted RBP14.15□□□□□ -0.14
PDGFB-203ENST00000440375 HSPD1P10809 573 aaKnown RBP14.15□□□□□ -0.14
PDGFB-203ENST00000440375 MCCP23508 829 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 HAND2P61296 217 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 KCTD1Q719H9 257 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 GMCL1Q96IK5 515 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 FGD4Q96M96 766 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 TINF2Q9BSI4 451 aa14.15□□□□□ -0.14
PDGFB-203ENST00000440375 ZNFX1Q9P2E3 1918 aaKnown RBP14.15□□□□□ -0.14
PDGFB-203ENST00000440375 LAMA2P24043 3122 aaKnown RBP14.14□□□□□ -0.15
PDGFB-203ENST00000440375 FGRP09769 529 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 SLC1A4P43007 532 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 NOVP48745 357 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 SNAP25P60880 206 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 RRP12Q5JTH9 1297 aaKnown RBP14.14□□□□□ -0.15
PDGFB-203ENST00000440375 TBC1D10CQ8IV04 446 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 HOMER2Q9NSB8 354 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 MTMR7Q9Y216 660 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 DIS3Q9Y2L1 958 aaKnown RBP14.14□□□□□ -0.15
PDGFB-203ENST00000440375 CTDP1Q9Y5B0 961 aaPredicted RBP14.14□□□□□ -0.15
PDGFB-203ENST00000440375 SUPT16HQ9Y5B9 1047 aaKnown RBP14.14□□□□□ -0.15
PDGFB-203ENST00000440375 ZNF536O15090 1300 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 ZMYM6O95789 1325 aa14.14□□□□□ -0.15
PDGFB-203ENST00000440375 ZNF865P0CJ78 1059 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-203ENST00000440375 SDSP20132 328 aa14.13□□□□□ -0.15
PDGFB-203ENST00000440375 STAT2P52630 851 aa14.13□□□□□ -0.15
PDGFB-203ENST00000440375 IKQ13123 557 aaPredicted RBP14.13□□□□□ -0.15
PDGFB-203ENST00000440375 LRRC41Q15345 812 aa14.13□□□□□ -0.15
PDGFB-203ENST00000440375 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.13□□□□□ -0.15
PDGFB-203ENST00000440375 AGBL1Q96MI9 1066 aa14.13□□□□□ -0.15
PDGFB-203ENST00000440375 OSBPL3Q9H4L5 887 aa14.13□□□□□ -0.15
PDGFB-203ENST00000440375 TOMM22Q9NS69 142 aa14.13□□□□□ -0.15
PDGFB-203ENST00000440375 NRBP1Q9UHY1 535 aa14.13□□□□□ -0.15
PDGFB-203ENST00000440375 A0A1W2PPC1 479 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 KBTBD13C9JR72 458 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 SNAI1O95863 264 aaPredicted RBP14.12□□□□□ -0.15
PDGFB-203ENST00000440375 PGK1P00558 417 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 BMP8BP34820 402 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 OAZ1P54368 228 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 RTP1P59025 263 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 IRX6P78412 446 aaPredicted RBP14.12□□□□□ -0.15
PDGFB-203ENST00000440375 TICAM2Q86XR7 235 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 ARRDC4Q8NCT1 418 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 STAG1Q8WVM7 1258 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 FERMT2Q96AC1 680 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 DDX11Q96FC9 970 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 LRCH3Q96II8 777 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 XPNPEP3Q9NQH7 507 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 NEDD4P46934 1319 aa14.12□□□□□ -0.15
PDGFB-203ENST00000440375 ADCY6O43306 1168 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 RARBP10826 455 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 PDE4AP27815 886 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 ADCYAP1R1P41586 468 aa14.11□□□□□ -0.15
PDGFB-203ENST00000440375 MDM2Q00987 491 aaPredicted RBP14.11□□□□□ -0.15
PDGFB-203ENST00000440375 CNTN2Q02246 1040 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms