RNA–Protein interactions for RNA: ENST00000434755.5

NOD1-206, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 4,610 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-206ENST00000434755 POLR2DO15514 142 aaKnown RBP11.93□□□□□ -0.5
NOD1-206ENST00000434755 MCM3P25205 808 aa11.93□□□□□ -0.5
NOD1-206ENST00000434755 IREB2P48200 963 aaKnown RBP11.93□□□□□ -0.5
NOD1-206ENST00000434755 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
NOD1-206ENST00000434755 SLC5A4Q9NY91 659 aa11.93□□□□□ -0.5
NOD1-206ENST00000434755 KLRF2D3W0D1 207 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 DDX39AO00148 427 aaKnown RBP11.92□□□□□ -0.5
NOD1-206ENST00000434755 CCNT1O60563 726 aaKnown RBP11.92□□□□□ -0.5
NOD1-206ENST00000434755 CCDC174Q6PII3 467 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 REXO1Q8N1G1 1221 aaKnown RBP11.92□□□□□ -0.5
NOD1-206ENST00000434755 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 FAM212AQ96EL1 285 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 DCP1AQ9NPI6 582 aaPredicted RBP11.92□□□□□ -0.5
NOD1-206ENST00000434755 SH3GLB2Q9NR46 395 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 ZNF500O60304 480 aaPredicted RBP11.92□□□□□ -0.5
NOD1-206ENST00000434755 HAUS3Q68CZ6 603 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 LINC00301Q8NCQ3 95 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 PCDHA7Q9UN72 937 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 SPICE1Q8N0Z3 855 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 CUEDC2Q9H467 287 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 KCNG1Q9UIX4 513 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 ZDHHC9Q9Y397 364 aa11.92□□□□□ -0.5
NOD1-206ENST00000434755 FRMPD2Q68DX3 1309 aaPredicted RBP11.92□□□□□ -0.5
NOD1-206ENST00000434755 USO1O60763 962 aaKnown RBP11.91□□□□□ -0.5
NOD1-206ENST00000434755 CHRNA5P30532 468 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 CDK8P49336 464 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 SEMA3FQ13275 785 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 SNW1Q13573 536 aaKnown RBP11.91□□□□□ -0.5
NOD1-206ENST00000434755 MYL1P05976 194 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 IVNS1ABPQ9Y6Y0 642 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 PFKFB1P16118 471 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 TM4SF1P30408 202 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 POSTNQ15063 836 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 DCAF4Q8WV16 495 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 TMCO5BA8MYB1 307 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 BTBD18B2RXH4 712 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 MMP1P03956 469 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 POTEJP0CG39 1038 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 RDXP35241 583 aaKnown RBP11.91□□□□□ -0.5
NOD1-206ENST00000434755 RSBN1LQ6PCB5 846 aaPredicted RBP11.91□□□□□ -0.5
NOD1-206ENST00000434755 BLIDQ8IZY5 108 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 ZNF341Q9BYN7 854 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
NOD1-206ENST00000434755 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.91□□□□□ -0.5
NOD1-206ENST00000434755 DPEP1P16444 411 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 LONP1P36776 959 aaKnown RBP11.9□□□□□ -0.5
NOD1-206ENST00000434755 CNGA4Q8IV77 575 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
NOD1-206ENST00000434755 IKBKBO14920 756 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 NEFHP12036 1026 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 ORC2Q13416 577 aaPredicted RBP11.9□□□□□ -0.5
NOD1-206ENST00000434755 PRPF4BQ13523 1007 aaKnown RBP11.9□□□□□ -0.5
NOD1-206ENST00000434755 TUBB2AQ13885 445 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 USP37Q86T82 979 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 FBXO11Q86XK2 927 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 TUBB2BQ9BVA1 445 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.9□□□□□ -0.5
NOD1-206ENST00000434755 AMNQ9BXJ7 453 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 FAM205AQ6ZU69 1335 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 GSG1L2A8MUP6 293 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 NR1I2O75469 434 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 CEP135Q66GS9 1140 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 GAS2L3Q86XJ1 694 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 GPIHBP1Q8IV16 184 aa11.9□□□□□ -0.5
NOD1-206ENST00000434755 FAM13AO94988 1023 aa11.9□□□□□ -0.51
NOD1-206ENST00000434755 HARSP12081 509 aaKnown RBP11.9□□□□□ -0.51
NOD1-206ENST00000434755 CASQ1P31415 396 aa11.9□□□□□ -0.51
NOD1-206ENST00000434755 CACNB3P54284 484 aa11.9□□□□□ -0.51
NOD1-206ENST00000434755 ZNF579Q8NAF0 562 aaKnown RBP11.9□□□□□ -0.51
NOD1-206ENST00000434755 SH3RF3Q8TEJ3 882 aaPredicted RBP11.9□□□□□ -0.51
NOD1-206ENST00000434755 GPHNQ9NQX3 736 aaPredicted RBP11.9□□□□□ -0.51
NOD1-206ENST00000434755 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.51
NOD1-206ENST00000434755 IFNKQ9P0W0 207 aa11.9□□□□□ -0.51
NOD1-206ENST00000434755 BIN2Q9UBW5 565 aaPredicted RBP11.9□□□□□ -0.51
NOD1-206ENST00000434755 PHACTR2O75167 634 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 CCT6AP40227 531 aaKnown RBP11.89□□□□□ -0.51
NOD1-206ENST00000434755 CNNM4Q6P4Q7 775 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 LRP10Q7Z4F1 713 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 GPKOWQ92917 476 aaPredicted RBP eCLIP11.89□□□□□ -0.51
NOD1-206ENST00000434755 DRC1Q96MC2 740 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 ZNF277Q9NRM2 450 aaPredicted RBP11.89□□□□□ -0.51
NOD1-206ENST00000434755 GPR75-ASB3A0A0A6YYF3 556 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 A0A0G2JLW4 131 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 IL1R1P14778 569 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 GNG11P61952 73 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 BRDTQ58F21 947 aaPredicted RBP11.89□□□□□ -0.51
NOD1-206ENST00000434755 KRBA2Q6ZNG9 492 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 AK8Q96MA6 479 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 COL16A1Q07092 1604 aaPredicted RBP11.89□□□□□ -0.51
NOD1-206ENST00000434755 CYLC1P35663 651 aaPredicted RBP11.89□□□□□ -0.51
NOD1-206ENST00000434755 CDR1P51861 262 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 CCNA1P78396 465 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 SCARF1Q14162 830 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 SV2BQ7L1I2 683 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 DYMQ7RTS9 669 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 KRT26Q7Z3Y9 468 aa11.89□□□□□ -0.51
NOD1-206ENST00000434755 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
NOD1-206ENST00000434755 NEDD1Q8NHV4 660 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms