RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 NOL7Q9UMY1 257 aaKnown RBP17.43■□□□□ 0.38
ACTB-204ENST00000425660 TRIM75PA6NK02 468 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 ADAMTS3O15072 1205 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 BMP15O95972 392 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 PTPREP23469 700 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 MAP3K11Q16584 847 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 ARHGAP27Q6ZUM4 889 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 SAMD7Q7Z3H4 446 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 ADGRF4Q8IZF3 695 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 GPC2Q8N158 579 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 TNMDQ9H2S6 317 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 JMJD4Q9H9V9 463 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 F5H6K3 240 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 CUTAO60888 179 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 YBX3P16989 372 aaKnown RBP eCLIP17.42■□□□□ 0.384e-46■□□□□ 9.9
ACTB-204ENST00000425660 SLC1A4P43007 532 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 KLRC3Q07444 240 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 KIF4BQ2VIQ3 1234 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 NOM1Q5C9Z4 860 aaKnown RBP17.42■□□□□ 0.38
ACTB-204ENST00000425660 SLFN13Q68D06 897 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 KRI1Q8N9T8 703 aaKnown RBP17.42■□□□□ 0.38
ACTB-204ENST00000425660 TSPY26PQ9H489 355 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 ZBTB21Q9ULJ3 1066 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 HPSEQ9Y251 543 aa17.42■□□□□ 0.38
ACTB-204ENST00000425660 DICER1Q9UPY3 1922 aaKnown RBP17.41■□□□□ 0.38
ACTB-204ENST00000425660 PNMA6FA0A0J9YX94 578 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 A0A1W2PRG0 241 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 GNA11P29992 359 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 CAP2P40123 477 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 NDUFA8P51970 172 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 NAPAP54920 295 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 TTBK2Q6IQ55 1244 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 SHC4Q6S5L8 630 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 PIK3AP1Q6ZUJ8 805 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 KCTD1Q719H9 257 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
ACTB-204ENST00000425660 RBSNQ9H1K0 784 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 VAT1LQ9HCJ6 419 aa17.41■□□□□ 0.38
ACTB-204ENST00000425660 FBXO2Q9UK22 296 aaPredicted RBP17.41■□□□□ 0.38
ACTB-204ENST00000425660 A0A1B0GVL5 298 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 CTAGE5O15320 804 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 NDUFB10O96000 172 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 CAMK4Q16566 473 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 CCDC96Q2M329 555 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 TBC1D10BQ4KMP7 808 aaPredicted RBP17.4■□□□□ 0.38
ACTB-204ENST00000425660 RESP18Q5W5W9 173 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 PPP1R18Q6NYC8 613 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 GPRC5DQ9NZD1 345 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 PCDHA6Q9UN73 950 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 TMX2Q9Y320 296 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 PCDHA8Q9Y5H6 950 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
ACTB-204ENST00000425660 PHF20L1A8MW92 1017 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 H7C1D1 291 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 ZBTB5O15062 677 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 KINO60870 393 aaKnown RBP17.4■□□□□ 0.38
ACTB-204ENST00000425660 TTC38Q5R3I4 469 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 MIGA2Q7L4E1 593 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 C6orf50Q9HD87 102 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 HACL1Q9UJ83 578 aa17.4■□□□□ 0.38
ACTB-204ENST00000425660 SMCO2A6NFE2 343 aa17.39■□□□□ 0.37
ACTB-204ENST00000425660 WNT7AO00755 349 aa17.39■□□□□ 0.37
ACTB-204ENST00000425660 PFKFB1P16118 471 aa17.39■□□□□ 0.37
ACTB-204ENST00000425660 ARHGEF10LQ9HCE6 1279 aa17.39■□□□□ 0.37
ACTB-204ENST00000425660 ASNSP08243 561 aa17.38■□□□□ 0.37
ACTB-204ENST00000425660 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
ACTB-204ENST00000425660 SLC16A2P36021 539 aa17.38■□□□□ 0.37
ACTB-204ENST00000425660 BTNL9Q6UXG8 535 aa17.38■□□□□ 0.37
ACTB-204ENST00000425660 DEFB129Q9H1M3 183 aa17.38■□□□□ 0.37
ACTB-204ENST00000425660 ASTN2O75129 1339 aaPredicted RBP17.38■□□□□ 0.37
ACTB-204ENST00000425660 CCDC194A0A1B0GVG4 234 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 USP17L10C9JJH3 530 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 PPP1R11O60927 126 aaPredicted RBP17.37■□□□□ 0.37
ACTB-204ENST00000425660 ATP2B1P20020 1258 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 ATP2C1P98194 919 aaPredicted RBP17.37■□□□□ 0.37
ACTB-204ENST00000425660 TIGD1Q96MW7 591 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 CLIC6Q96NY7 704 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 GINM1Q9NU53 330 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 SBF1O95248 1867 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 ZNF202O95125 648 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 ECE1P42892 770 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 KRT25Q7Z3Z0 450 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 RASGRP4Q8TDF6 673 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 FERMT2Q96AC1 680 aa17.37■□□□□ 0.37
ACTB-204ENST00000425660 BMP3P12645 472 aa17.36■□□□□ 0.37
ACTB-204ENST00000425660 APOBEC3FQ8IUX4 373 aaKnown RBP17.36■□□□□ 0.37
ACTB-204ENST00000425660 CKAP2LQ8IYA6 745 aa17.36■□□□□ 0.37
ACTB-204ENST00000425660 ACER1Q8TDN7 264 aa17.36■□□□□ 0.37
ACTB-204ENST00000425660 PANK2Q9BZ23 570 aa17.36■□□□□ 0.37
ACTB-204ENST00000425660 SH2D4AQ9H788 454 aa17.36■□□□□ 0.37
ACTB-204ENST00000425660 GOPCQ9HD26 462 aa17.36■□□□□ 0.37
ACTB-204ENST00000425660 SYKP43405 635 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 GRIN1Q05586 938 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 PTGDRQ13258 359 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 ZNF174Q15697 407 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 GPR162Q16538 588 aa17.35■□□□□ 0.37
ACTB-204ENST00000425660 REXO1Q8N1G1 1221 aaKnown RBP17.35■□□□□ 0.37
ACTB-204ENST00000425660 TRPM4Q8TD43 1214 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms