RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 KIFC2Q96AC6 838 aa19.25■□□□□ 0.67
COL18A1-205ENST00000423214 DDX11Q96FC9 970 aa19.25■□□□□ 0.67
COL18A1-205ENST00000423214 ISY1Q9ULR0 285 aaKnown RBP19.25■□□□□ 0.67
COL18A1-205ENST00000423214 LAMA2P24043 3122 aaKnown RBP19.25■□□□□ 0.67
COL18A1-205ENST00000423214 ZBED4O75132 1171 aa19.24■□□□□ 0.67
COL18A1-205ENST00000423214 SLC3A2P08195 630 aaKnown RBP19.24■□□□□ 0.67
COL18A1-205ENST00000423214 SNX17Q15036 470 aa19.24■□□□□ 0.67
COL18A1-205ENST00000423214 LRRC47Q8N1G4 583 aaKnown RBP19.24■□□□□ 0.67
COL18A1-205ENST00000423214 CEP95Q96GE4 821 aa19.24■□□□□ 0.67
COL18A1-205ENST00000423214 NAPBQ9H115 298 aa19.24■□□□□ 0.67
COL18A1-205ENST00000423214 TTLL1O95922 423 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 PGK1P00558 417 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 TSPY3P0CV98 308 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 TSPY8P0CW00 308 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 PDE4BQ07343 736 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 IFNL3Q8IZI9 196 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 CPXCR1Q8N123 301 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 PDLIM7Q9NR12 457 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 MTMR10Q9NXD2 777 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 FEM1BQ9UK73 627 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 SYNPO2Q9UMS6 1093 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 PHF24Q9UPV7 400 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 SYNGAP1Q96PV0 1343 aa19.23■□□□□ 0.67
COL18A1-205ENST00000423214 IGKV6D-41A0A0C4DH26 115 aa19.22■□□□□ 0.67
COL18A1-205ENST00000423214 PATL2C9JE40 543 aaKnown RBP19.22■□□□□ 0.67
COL18A1-205ENST00000423214 TAL1P17542 331 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-205ENST00000423214 MSL3Q8N5Y2 521 aaKnown RBP19.22■□□□□ 0.67
COL18A1-205ENST00000423214 PI4K2BQ8TCG2 481 aa19.22■□□□□ 0.67
COL18A1-205ENST00000423214 LENG1Q96BZ8 264 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-205ENST00000423214 MTMR4Q9NYA4 1195 aa19.22■□□□□ 0.67
COL18A1-205ENST00000423214 ZBTB47Q9UFB7 747 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-205ENST00000423214 ZHX1Q9UKY1 873 aaPredicted RBP19.22■□□□□ 0.67
COL18A1-205ENST00000423214 STXBP5LQ9Y2K9 1186 aa19.22■□□□□ 0.67
COL18A1-205ENST00000423214 IKQ13123 557 aaPredicted RBP19.21■□□□□ 0.67
COL18A1-205ENST00000423214 C1orf53Q5VUE5 145 aa19.21■□□□□ 0.67
COL18A1-205ENST00000423214 GMCL1P1Q8NEA9 526 aa19.21■□□□□ 0.67
COL18A1-205ENST00000423214 RAVER2Q9HCJ3 691 aaKnown RBP19.21■□□□□ 0.67
COL18A1-205ENST00000423214 FBXO40Q9UH90 709 aa19.21■□□□□ 0.67
COL18A1-205ENST00000423214 LCTP09848 1927 aa19.21■□□□□ 0.67
COL18A1-205ENST00000423214 A0A1W2PQ45 241 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-205ENST00000423214 A0A1W2PQY0 241 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 ATP2A1O14983 1001 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 ZNF865P0CJ78 1059 aaPredicted RBP19.2■□□□□ 0.66
COL18A1-205ENST00000423214 MX1P20591 662 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 PPARAQ07869 468 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 ANKRD35Q8N283 1001 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 BADQ92934 168 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 SEC62Q99442 399 aaKnown RBP19.2■□□□□ 0.66
COL18A1-205ENST00000423214 SLC38A10Q9HBR0 1119 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 FAM184BQ9ULE4 1060 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 RIPK3Q9Y572 518 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 SYNRGQ9UMZ2 1314 aa19.2■□□□□ 0.66
COL18A1-205ENST00000423214 CLTBP09497 229 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 BMP3P12645 472 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 STAT2P52630 851 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 TLE2Q04725 743 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 ZMYM1Q5SVZ6 1142 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 ZNF697Q5TEC3 545 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 SLFN13Q68D06 897 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 NEDD1Q8NHV4 660 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 MKL1Q969V6 931 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 HOMER2Q9NSB8 354 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
COL18A1-205ENST00000423214 DNAJC25-GNG10A0A024R161 153 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 PQBP1O60828 265 aaKnown RBP19.18■□□□□ 0.66
COL18A1-205ENST00000423214 OAZ1P54368 228 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 PPP4R3BQ5MIZ7 849 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 FAM109BQ6ICB4 259 aaPredicted RBP19.18■□□□□ 0.66
COL18A1-205ENST00000423214 MAMDC4Q6UXC1 1216 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 SH3RF1Q7Z6J0 888 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 ZNF467Q7Z7K2 595 aaPredicted RBP19.18■□□□□ 0.66
COL18A1-205ENST00000423214 CHST13Q8NET6 341 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 OTUD7AQ8TE49 926 aaPredicted RBP19.18■□□□□ 0.66
COL18A1-205ENST00000423214 NUP133Q8WUM0 1156 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 FAM161BQ96MY7 647 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 STARD7Q9NQZ5 370 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 TACC3Q9Y6A5 838 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 LAMA4Q16363 1823 aa19.18■□□□□ 0.66
COL18A1-205ENST00000423214 CUL9Q8IWT3 2517 aa19.17■□□□□ 0.66
COL18A1-205ENST00000423214 TRIM43BA6NCK2 446 aa19.17■□□□□ 0.66
COL18A1-205ENST00000423214 DLL1O00548 723 aa19.17■□□□□ 0.66
COL18A1-205ENST00000423214 ADAMTS4O75173 837 aa19.17■□□□□ 0.66
COL18A1-205ENST00000423214 FDX1P10109 184 aa19.17■□□□□ 0.66
COL18A1-205ENST00000423214 TFAP4Q01664 338 aa19.17■□□□□ 0.66
COL18A1-205ENST00000423214 SHHQ15465 462 aa19.17■□□□□ 0.66
COL18A1-205ENST00000423214 TRIM43Q96BQ3 446 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-205ENST00000423214 TSEN34Q9BSV6 310 aaKnown RBP19.17■□□□□ 0.66
COL18A1-205ENST00000423214 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.17■□□□□ 0.66
COL18A1-205ENST00000423214 MYH6P13533 1939 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 MOXD2PA6NHM9 499 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 TSPY2A6NKD2 308 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 TMEM232C9JQI7 657 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 RAG1P15918 1043 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 SLC1A4P43007 532 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 ACLYP53396 1101 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 C9orf50Q5SZB4 431 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.16■□□□□ 0.66
COL18A1-205ENST00000423214 FAM160B2Q86V87 743 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 ACAD9Q9H845 621 aa19.16■□□□□ 0.66
COL18A1-205ENST00000423214 SPC25Q9HBM1 224 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms