RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 KRT86O43790 486 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 GTPBP6O43824 516 aaPredicted RBP18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 RPN1P04843 607 aaKnown RBP18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 ARID4AP29374 1257 aaPredicted RBP18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 SLC7A5Q01650 507 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 ZBTB38Q8NAP3 1195 aaPredicted RBP18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 ZNF507Q8TCN5 953 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 LRRC1Q9BTT6 524 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 FAM107BQ9H098 131 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 CAPN11Q9UMQ6 739 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 SLC4A4Q9Y6R1 1079 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 BAZ2BQ9UIF8 2168 aaKnown RBP18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 LGALS16A8MUM7 142 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 PDE8BO95263 885 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 ATP2C1P98194 919 aaPredicted RBP18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 NPY5RQ15761 445 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 MIGA1Q8NAN2 632 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 PLA2G12BQ9BX93 195 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 SMARCAL1Q9NZC9 954 aa18.68■□□□□ 0.58
NPC1L1-203ENST00000423141 TNKSO95271 1327 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 ADAMTS3O15072 1205 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 MATR3P43243 847 aaKnown RBP eCLIP18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 TSEN2Q8NCE0 465 aaKnown RBP18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 ARL8AQ96BM9 186 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 UBAC1Q9BSL1 405 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 B4DLN1 442 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 KRT83P78385 493 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 FUT2Q10981 343 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 RASGRF1Q13972 1273 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 TSR1Q2NL82 804 aaKnown RBP18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 SWT1Q5T5J6 900 aaKnown RBP18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 ANKRD18AQ8IVF6 992 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 SPATA5Q8NB90 893 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 TNFRSF25Q93038 417 aa18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 NHEJ1Q9H9Q4 299 aaPredicted RBP18.67■□□□□ 0.58
NPC1L1-203ENST00000423141 RASSF10A6NK89 507 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 TTMPQ5BVD1 217 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 CREG2Q8IUH2 290 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 MYH13Q9UKX3 1938 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 KCPQ6ZWJ8 1503 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 XBP1P17861 261 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 MCM7P33993 719 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 MNAT1P51948 309 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 MEA1Q16626 185 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 KRT26Q7Z3Y9 468 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 EHBP1Q8NDI1 1231 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 PSMB7Q99436 277 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 SH3GL2Q99962 352 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 EHD2Q9NZN4 543 aa18.66■□□□□ 0.58
NPC1L1-203ENST00000423141 FER1L4A9Z1Z3 1794 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 TIAM2Q8IVF5 1701 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 H7C1D1 291 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 INPP5BP32019 993 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 PDCLQ13371 301 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 SEC23AQ15436 765 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 PAXIP1Q6ZW49 1069 aaPredicted RBP18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 PDS5AQ29RF7 1337 aaKnown RBP18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 SHTN1A0MZ66 631 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 ANKRD18BA2A2Z9 1011 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 ZNF263O14978 683 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 MAP3K12Q12852 859 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 ADSSL1Q8N142 457 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 CEP89Q96ST8 783 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 CAPN6Q9Y6Q1 641 aa18.65■□□□□ 0.58
NPC1L1-203ENST00000423141 A0A1W2PQC6 194 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 MINDY4BA8MYZ0 360 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 PLEKP08567 350 aaPredicted RBP18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 PIK3AP1Q6ZUJ8 805 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 GPIHBP1Q8IV16 184 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 TMTC2Q8N394 836 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 SH2D3CQ8N5H7 860 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 TTYH3Q9C0H2 523 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 LRWD1Q9UFC0 647 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 ANO9A1A5B4 782 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 BMP15O95972 392 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 TRIM21P19474 475 aaKnown RBP18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 CXCR5P32302 372 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 CYLC1P35663 651 aaPredicted RBP18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 TRIM28Q13263 835 aaKnown RBP18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 HLFQ16534 295 aa18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 PURBQ96QR8 312 aaKnown RBP18.64■□□□□ 0.57
NPC1L1-203ENST00000423141 NKRFO15226 690 aaKnown RBP eCLIP18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 UQCRFS1P1P0C7P4 283 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 CTSWP56202 376 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 KCTD16Q68DU8 428 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 ZNF662Q6ZS27 426 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 AMOTL1Q8IY63 956 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 ENAHQ8N8S7 591 aaPredicted RBP18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 SDR42E1Q8WUS8 393 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 NACAP1Q9BZK3 213 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 MLXIPQ9HAP2 919 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 SNX12Q9UMY4 172 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 VEGFAP15692 232 aaPredicted RBP18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 ATP1A2P50993 1020 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 MMGT1Q8N4V1 131 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 SECISBP2LQ93073 1101 aaKnown RBP18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 TRIM47Q96LD4 638 aa18.63■□□□□ 0.57
NPC1L1-203ENST00000423141 GOLGA8KD6RF30 607 aa18.62■□□□□ 0.57
NPC1L1-203ENST00000423141 MYO1FO00160 1098 aa18.62■□□□□ 0.57
NPC1L1-203ENST00000423141 PRPF3O43395 683 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms