RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 TRMT44Q8IYL2 757 aaKnown RBP25.19■■□□□ 1.62
CPNE1-211ENST00000420363 APBA2Q99767 749 aa25.19■■□□□ 1.62
CPNE1-211ENST00000420363 MROH8Q9H579 483 aa25.19■■□□□ 1.62
CPNE1-211ENST00000420363 HMX1Q9NP08 348 aaPredicted RBP25.19■■□□□ 1.62
CPNE1-211ENST00000420363 RPTORQ8N122 1335 aa25.18■■□□□ 1.62
CPNE1-211ENST00000420363 PLA2G6O60733 806 aa25.18■■□□□ 1.62
CPNE1-211ENST00000420363 SLC25A27O95847 323 aa25.18■■□□□ 1.62
CPNE1-211ENST00000420363 CYP2B6P20813 491 aa25.18■■□□□ 1.62
CPNE1-211ENST00000420363 PTPREP23469 700 aa25.18■■□□□ 1.62
CPNE1-211ENST00000420363 NECAB2Q7Z6G3 386 aa25.18■■□□□ 1.62
CPNE1-211ENST00000420363 SKAP1Q86WV1 359 aa25.18■■□□□ 1.62
CPNE1-211ENST00000420363 KRT23Q9C075 422 aa25.18■■□□□ 1.62
CPNE1-211ENST00000420363 ZNF214Q9UL59 606 aaPredicted RBP25.18■■□□□ 1.62
CPNE1-211ENST00000420363 ATP2A1O14983 1001 aa25.17■■□□□ 1.62
CPNE1-211ENST00000420363 STRNO43815 780 aa25.17■■□□□ 1.62
CPNE1-211ENST00000420363 FDX1P10109 184 aa25.17■■□□□ 1.62
CPNE1-211ENST00000420363 ERCC3P19447 782 aa25.17■■□□□ 1.62
CPNE1-211ENST00000420363 SLC1A4P43007 532 aa25.17■■□□□ 1.62
CPNE1-211ENST00000420363 PTH1RQ03431 593 aa25.17■■□□□ 1.62
CPNE1-211ENST00000420363 IQCA1Q86XH1 822 aa25.17■■□□□ 1.62
CPNE1-211ENST00000420363 RIOX2Q8IUF8 465 aa25.17■■□□□ 1.62
CPNE1-211ENST00000420363 HOXC6P09630 235 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 STAT2P52630 851 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 TRIM32Q13049 653 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 MAP2K5Q13163 448 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 WDR78Q5VTH9 848 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 RCSD1Q6JBY9 416 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 SAMD1Q6SPF0 538 aaPredicted RBP25.16■■□□□ 1.62
CPNE1-211ENST00000420363 FAM160B2Q86V87 743 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 ABRAQ8N0Z2 381 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 ANKLE1Q8NAG6 615 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 DCAF4Q8WV16 495 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 MAP4K1Q92918 833 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 TMEM47Q9BQJ4 181 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 ESYT1Q9BSJ8 1104 aa25.16■■□□□ 1.62
CPNE1-211ENST00000420363 B4E1Z4 1266 aa25.15■■□□□ 1.62
CPNE1-211ENST00000420363 KDM4AO75164 1064 aa25.15■■□□□ 1.62
CPNE1-211ENST00000420363 PLS1Q14651 629 aa25.15■■□□□ 1.62
CPNE1-211ENST00000420363 DGKHQ86XP1 1220 aa25.15■■□□□ 1.62
CPNE1-211ENST00000420363 TEX13BQ9BXU2 312 aa25.15■■□□□ 1.62
CPNE1-211ENST00000420363 SLC38A10Q9HBR0 1119 aa25.15■■□□□ 1.62
CPNE1-211ENST00000420363 CYP21A2P08686 494 aa25.14■■□□□ 1.62
CPNE1-211ENST00000420363 STAT3P40763 770 aa25.14■■□□□ 1.62
CPNE1-211ENST00000420363 OAZ1P54368 228 aa25.14■■□□□ 1.62
CPNE1-211ENST00000420363 DIS3LQ8TF46 1054 aaKnown RBP25.14■■□□□ 1.62
CPNE1-211ENST00000420363 CHURC1Q8WUH1 139 aa25.14■■□□□ 1.62
CPNE1-211ENST00000420363 TRIB2Q92519 343 aa25.14■■□□□ 1.62
CPNE1-211ENST00000420363 PPP4R2Q9NY27 417 aa25.14■■□□□ 1.62
CPNE1-211ENST00000420363 TMEM232C9JQI7 657 aa25.13■■□□□ 1.61
CPNE1-211ENST00000420363 ZBED4O75132 1171 aa25.13■■□□□ 1.61
CPNE1-211ENST00000420363 ZKSCAN1P17029 563 aaPredicted RBP25.13■■□□□ 1.61
CPNE1-211ENST00000420363 MCCP23508 829 aa25.13■■□□□ 1.61
CPNE1-211ENST00000420363 KIAA1211Q6ZU35 1233 aa25.13■■□□□ 1.61
CPNE1-211ENST00000420363 NCAPG2Q86XI2 1143 aa25.13■■□□□ 1.61
CPNE1-211ENST00000420363 ANKS1AQ92625 1134 aa25.13■■□□□ 1.61
CPNE1-211ENST00000420363 KIFC2Q96AC6 838 aa25.13■■□□□ 1.61
CPNE1-211ENST00000420363 PRO3102Q9H379 93 aa25.13■■□□□ 1.61
CPNE1-211ENST00000420363 RANBP2P49792 3224 aaKnown RBP25.12■■□□□ 1.61
CPNE1-211ENST00000420363 SNHG28P0DPA3 235 aa25.12■■□□□ 1.61
CPNE1-211ENST00000420363 CASC1Q6TDU7 716 aa25.12■■□□□ 1.61
CPNE1-211ENST00000420363 ZSCAN10Q96SZ4 725 aaPredicted RBP25.12■■□□□ 1.61
CPNE1-211ENST00000420363 LSG1Q9H089 658 aaKnown RBP25.12■■□□□ 1.61
CPNE1-211ENST00000420363 CDC45O75419 566 aa25.11■■□□□ 1.61
CPNE1-211ENST00000420363 PRKAR2AP13861 404 aaKnown RBP25.11■■□□□ 1.61
CPNE1-211ENST00000420363 ADORA2AP29274 412 aa25.11■■□□□ 1.61
CPNE1-211ENST00000420363 TRDNQ13061 729 aa25.11■■□□□ 1.61
CPNE1-211ENST00000420363 MAP3K21Q5TCX8 1036 aa25.11■■□□□ 1.61
CPNE1-211ENST00000420363 KCTD1Q719H9 257 aa25.11■■□□□ 1.61
CPNE1-211ENST00000420363 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.11■■□□□ 1.613e-8■□□□□ 9.3
CPNE1-211ENST00000420363 ZSWIM5Q9P217 1185 aa25.11■■□□□ 1.61
CPNE1-211ENST00000420363 CTDP1Q9Y5B0 961 aaPredicted RBP25.11■■□□□ 1.61
CPNE1-211ENST00000420363 RBM8AQ9Y5S9 174 aaKnown RBP25.11■■□□□ 1.61
CPNE1-211ENST00000420363 PDHBP11177 359 aa25.1■■□□□ 1.61
CPNE1-211ENST00000420363 CCDC96Q2M329 555 aa25.1■■□□□ 1.61
CPNE1-211ENST00000420363 SNRNP48Q6IEG0 339 aaKnown RBP25.1■■□□□ 1.61
CPNE1-211ENST00000420363 BTNL9Q6UXG8 535 aa25.1■■□□□ 1.61
CPNE1-211ENST00000420363 RASGRP2Q7LDG7 609 aa25.1■■□□□ 1.61
CPNE1-211ENST00000420363 UBAC1Q9BSL1 405 aa25.1■■□□□ 1.61
CPNE1-211ENST00000420363 ISY1Q9ULR0 285 aaKnown RBP25.1■■□□□ 1.61
CPNE1-211ENST00000420363 TNKSO95271 1327 aa25.1■■□□□ 1.61
CPNE1-211ENST00000420363 FCER1AP12319 257 aa25.09■■□□□ 1.61
CPNE1-211ENST00000420363 IKQ13123 557 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-211ENST00000420363 ENAHQ8N8S7 591 aaPredicted RBP25.09■■□□□ 1.61
CPNE1-211ENST00000420363 ZKSCAN3Q9BRR0 538 aa25.09■■□□□ 1.61
CPNE1-211ENST00000420363 SLC5A4Q9NY91 659 aa25.09■■□□□ 1.61
CPNE1-211ENST00000420363 OGDHLQ9ULD0 1010 aa25.09■■□□□ 1.61
CPNE1-211ENST00000420363 ZNFX1Q9P2E3 1918 aaKnown RBP25.09■■□□□ 1.61
CPNE1-211ENST00000420363 A0A1W2PPC1 479 aa25.08■■□□□ 1.61
CPNE1-211ENST00000420363 C7orf61Q8IZ16 206 aa25.08■■□□□ 1.61
CPNE1-211ENST00000420363 C11orf49Q9H6J7 331 aa25.08■■□□□ 1.61
CPNE1-211ENST00000420363 PLXNA1Q9UIW2 1896 aa25.08■■□□□ 1.61
CPNE1-211ENST00000420363 E7EWF7 191 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 IGHA2P01877 340 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 CACNB2Q08289 660 aaPredicted RBP25.07■■□□□ 1.6
CPNE1-211ENST00000420363 ZNF543Q08ER8 600 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 CCL14Q16627 93 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 OLFML2BQ68BL8 750 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 RALYLQ86SE5 291 aaKnown RBP25.07■■□□□ 1.6
CPNE1-211ENST00000420363 DPP9Q86TI2 863 aa25.07■■□□□ 1.6
CPNE1-211ENST00000420363 PNMA1Q8ND90 353 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms