RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
SSBP3-206ENST00000420121 DDX20Q9UHI6 824 aaKnown RBP13.14□□□□□ -0.31
SSBP3-206ENST00000420121 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
SSBP3-206ENST00000420121 LCTP09848 1927 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 RAD21O60216 631 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 TTLL1O95922 423 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 TSPY3P0CV98 308 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 TSPY8P0CW00 308 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 FCER1AP12319 257 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 NOVP48745 357 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 TFAP4Q01664 338 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
SSBP3-206ENST00000420121 CHD1LQ86WJ1 897 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 TICAM2Q86XR7 235 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
SSBP3-206ENST00000420121 LAMA3Q16787 3333 aa13.13□□□□□ -0.31
SSBP3-206ENST00000420121 ATP2A1O14983 1001 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 NMT2O60551 498 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 FGAP02671 866 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 PGK2P07205 417 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 ZNF792Q3KQV3 632 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 MCMDC2Q4G0Z9 681 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 PRAMEF19Q5SWL8 479 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.12□□□□□ -0.31
SSBP3-206ENST00000420121 RASGRP2Q7LDG7 609 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 PRPF38AQ8NAV1 312 aaKnown RBP13.12□□□□□ -0.31
SSBP3-206ENST00000420121 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 ZMYM6O95789 1325 aa13.12□□□□□ -0.31
SSBP3-206ENST00000420121 LTBP2Q14767 1821 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 DNAJC25-GNG10A0A024R161 153 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 ORC4O43929 436 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 SLC3A2P08195 630 aaKnown RBP13.11□□□□□ -0.31
SSBP3-206ENST00000420121 HSPD1P10809 573 aaKnown RBP13.11□□□□□ -0.31
SSBP3-206ENST00000420121 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 SLFN13Q68D06 897 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 SNRNP48Q6IEG0 339 aaKnown RBP13.11□□□□□ -0.31
SSBP3-206ENST00000420121 C7orf61Q8IZ16 206 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 MMP19Q99542 508 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 TEX13BQ9BXU2 312 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 SLC38A10Q9HBR0 1119 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
SSBP3-206ENST00000420121 CCDC171Q6TFL3 1326 aa13.11□□□□□ -0.31
SSBP3-206ENST00000420121 LRRC37A2A6NM11 1700 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 SEPT4O43236 478 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 MSCO60682 206 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 BMP3P12645 472 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 CNGA1P29973 690 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 COPB2P35606 906 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 ANO1Q5XXA6 986 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 KIFC2Q96AC6 838 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 GMCL1Q96IK5 515 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 FGD4Q96M96 766 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 GDF15Q99988 308 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 SLC5A4Q9NY91 659 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 FEM1BQ9UK73 627 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 ZMYND8Q9ULU4 1186 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-206ENST00000420121 DIS3Q9Y2L1 958 aaKnown RBP13.1□□□□□ -0.31
SSBP3-206ENST00000420121 ZNF536O15090 1300 aa13.1□□□□□ -0.31
SSBP3-206ENST00000420121 TSPY2A6NKD2 308 aa13.09□□□□□ -0.31
SSBP3-206ENST00000420121 TRIM6-TRIM34B2RNG4 842 aa13.09□□□□□ -0.31
SSBP3-206ENST00000420121 TMEM232C9JQI7 657 aa13.09□□□□□ -0.31
SSBP3-206ENST00000420121 TAL1P17542 331 aaPredicted RBP13.09□□□□□ -0.31
SSBP3-206ENST00000420121 SDSP20132 328 aa13.09□□□□□ -0.31
SSBP3-206ENST00000420121 KCTD2Q14681 263 aa13.09□□□□□ -0.31
SSBP3-206ENST00000420121 CPXCR1Q8N123 301 aa13.09□□□□□ -0.31
SSBP3-206ENST00000420121 RILPL2Q969X0 211 aa13.09□□□□□ -0.31
SSBP3-206ENST00000420121 TINF2Q9BSI4 451 aa13.09□□□□□ -0.31
SSBP3-206ENST00000420121 RAVER2Q9HCJ3 691 aaKnown RBP13.09□□□□□ -0.31
SSBP3-206ENST00000420121 DNM1LO00429 736 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 PLA2G6O60733 806 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 ZBED4O75132 1171 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 ZNF865P0CJ78 1059 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-206ENST00000420121 SYN1P17600 705 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 MCCP23508 829 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 PDE4AP27815 886 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 OAZ1P54368 228 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 GJC2Q5T442 439 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-206ENST00000420121 TBC1D10CQ8IV04 446 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 STX8Q9UNK0 236 aa13.08□□□□□ -0.32
SSBP3-206ENST00000420121 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
SSBP3-206ENST00000420121 SNAI1O95863 264 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-206ENST00000420121 STAT2P52630 851 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 HAND2P61296 217 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 RCSD1Q6JBY9 416 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 MAMDC4Q6UXC1 1216 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 KCTD1Q719H9 257 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 STAG1Q8WVM7 1258 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 CHMP4CQ96CF2 233 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 SENP6Q9GZR1 1112 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-206ENST00000420121 IL25Q9H293 177 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 TCP11L1Q9NUJ3 509 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 NRBP1Q9UHY1 535 aa13.07□□□□□ -0.32
SSBP3-206ENST00000420121 A0A1W2PPC1 479 aa13.06□□□□□ -0.32
SSBP3-206ENST00000420121 FDX1P10109 184 aa13.06□□□□□ -0.32
SSBP3-206ENST00000420121 BMP8BP34820 402 aa13.06□□□□□ -0.32
SSBP3-206ENST00000420121 SLC1A4P43007 532 aa13.06□□□□□ -0.32
SSBP3-206ENST00000420121 MAGEA10P43363 369 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-206ENST00000420121 LRRC41Q15345 812 aa13.06□□□□□ -0.32
SSBP3-206ENST00000420121 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms