RNA–Protein interactions for RNA: ENST00000419069.1

LINC00317-201, long intergenic non-protein coding RNA 317, humanhuman

TSL 1 (best) BASIC

Gene LINC00317, Length 612 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00317-201ENST00000419069 ARHGEF15O94989 841 aa8.39□□□□□ -1.07
LINC00317-201ENST00000419069 SNRPB2P08579 225 aaKnown RBP8.39□□□□□ -1.07
LINC00317-201ENST00000419069 SDSP20132 328 aa8.39□□□□□ -1.07
LINC00317-201ENST00000419069 CDKN1CP49918 316 aaPredicted RBP8.39□□□□□ -1.07
LINC00317-201ENST00000419069 GABREP78334 506 aa8.39□□□□□ -1.07
LINC00317-201ENST00000419069 GRB10Q13322 594 aa8.39□□□□□ -1.07
LINC00317-201ENST00000419069 UVSSAQ2YD98 709 aa8.39□□□□□ -1.07
LINC00317-201ENST00000419069 RNF180Q86T96 592 aa8.39□□□□□ -1.07
LINC00317-201ENST00000419069 ATL2Q8NHH9 583 aa8.39□□□□□ -1.07
LINC00317-201ENST00000419069 EZH1Q92800 747 aaPredicted RBP8.39□□□□□ -1.07
LINC00317-201ENST00000419069 FAM46AQ96IP4 442 aaKnown RBP8.39□□□□□ -1.07
LINC00317-201ENST00000419069 PRR13Q9NZ81 148 aa8.39□□□□□ -1.07
LINC00317-201ENST00000419069 G3BP2Q9UN86 482 aaKnown RBP8.39□□□□□ -1.07
LINC00317-201ENST00000419069 FAM95CA0A1B0GW59 222 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 CAPNS1P04632 268 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 APPP05067 770 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 BMP3P12645 472 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 CPEP16870 476 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 MAP4P27816 1152 aaKnown RBP8.38□□□□□ -1.07
LINC00317-201ENST00000419069 HOXC12P31275 282 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 IREB2P48200 963 aaKnown RBP8.38□□□□□ -1.07
LINC00317-201ENST00000419069 EVA1CP58658 441 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 MAP4K2Q12851 820 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 SNW1Q13573 536 aaKnown RBP8.38□□□□□ -1.07
LINC00317-201ENST00000419069 TRIM61Q5EBN2 209 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 BRAPQ7Z569 592 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 DDX42Q86XP3 938 aaKnown RBP eCLIP8.38□□□□□ -1.07
LINC00317-201ENST00000419069 PPM1KQ8N3J5 372 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 GIMAP7Q8NHV1 300 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 WFDC12Q8WWY7 111 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 PSMG3-AS1Q96PY0 264 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 UBL7Q96S82 380 aaPredicted RBP8.38□□□□□ -1.07
LINC00317-201ENST00000419069 FAM126AQ9BYI3 521 aaPredicted RBP8.38□□□□□ -1.07
LINC00317-201ENST00000419069 ASCC2Q9H1I8 757 aaPredicted RBP8.38□□□□□ -1.07
LINC00317-201ENST00000419069 SLC52A2Q9HAB3 445 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 KCNH3Q9ULD8 1083 aa8.38□□□□□ -1.07
LINC00317-201ENST00000419069 OPA1O60313 960 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 LRRN2O75325 713 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 DNAJC8O75937 253 aaPredicted RBP8.37□□□□□ -1.07
LINC00317-201ENST00000419069 PARNO95453 639 aaKnown RBP8.37□□□□□ -1.07
LINC00317-201ENST00000419069 C6orf222P0C671 652 aaPredicted RBP8.37□□□□□ -1.07
LINC00317-201ENST00000419069 NOS3P29474 1203 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 GFRA1P56159 465 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 AMPD2Q01433 879 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 ODR4Q5SWX8 454 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 PAOXQ6QHF9 649 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 AHI1Q8N157 1196 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 BEND7Q8N7W2 519 aaPredicted RBP8.37□□□□□ -1.07
LINC00317-201ENST00000419069 LEO1Q8WVC0 666 aaPredicted RBP8.37□□□□□ -1.07
LINC00317-201ENST00000419069 COX4I2Q96KJ9 171 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 NKX2-4Q9H2Z4 354 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 KCNF1Q9H3M0 494 aa8.37□□□□□ -1.07
LINC00317-201ENST00000419069 PRDM5Q9NQX1 630 aaPredicted RBP8.37□□□□□ -1.07
LINC00317-201ENST00000419069 GPR55Q9Y2T6 319 aaPredicted RBP8.37□□□□□ -1.07
LINC00317-201ENST00000419069 BLACEA4D250 179 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 ALG1L2C9J202 215 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 ITIH2P19823 946 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 ECI1P42126 302 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 NEK4P51957 841 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 SF1Q15637 639 aaKnown RBP8.36□□□□□ -1.07
LINC00317-201ENST00000419069 DDX46Q7L014 1031 aaKnown RBP8.36□□□□□ -1.07
LINC00317-201ENST00000419069 TMEM145Q8NBT3 493 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 SLC7A14Q8TBB6 771 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 JDP2Q8WYK2 163 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 DDX1Q92499 740 aaKnown RBP8.36□□□□□ -1.07
LINC00317-201ENST00000419069 PTPRN2Q92932 1015 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 MYRFLQ96LU7 910 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 TRIM39Q9HCM9 518 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 CHST7Q9NS84 486 aa8.36□□□□□ -1.07
LINC00317-201ENST00000419069 MEIS1O00470 390 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 SIGLEC6O43699 453 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 CBX7O95931 251 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 CPP00450 1065 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 ASLP04424 464 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 POU3F3P20264 500 aaPredicted RBP8.35□□□□□ -1.07
LINC00317-201ENST00000419069 FLT3P36888 993 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 FAM50AQ14320 339 aaKnown RBP8.35□□□□□ -1.07
LINC00317-201ENST00000419069 NFKBIBQ15653 356 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 DPY19L1Q2PZI1 675 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 SFRP5Q5T4F7 317 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 CWF19L1Q69YN2 538 aaKnown RBP8.35□□□□□ -1.07
LINC00317-201ENST00000419069 USP53Q70EK8 1073 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 TMC3Q7Z5M5 1100 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 MAGEB10Q96LZ2 347 aaPredicted RBP8.35□□□□□ -1.07
LINC00317-201ENST00000419069 DUSP23Q9BVJ7 150 aa8.35□□□□□ -1.07
LINC00317-201ENST00000419069 TNPO3Q9Y5L0 923 aaKnown RBP8.35□□□□□ -1.07
LINC00317-201ENST00000419069 VAMP4O75379 141 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 EOMESO95936 686 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 PMLP29590 882 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 EXOSC10Q01780 885 aaKnown RBP8.34□□□□□ -1.07
LINC00317-201ENST00000419069 POU4F1Q01851 419 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 NMIQ13287 307 aaPredicted RBP8.34□□□□□ -1.07
LINC00317-201ENST00000419069 CCDC181Q5TID7 509 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 SEZ6L2Q6UXD5 910 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 MAMDC2Q7Z304 686 aaPredicted RBP8.34□□□□□ -1.07
LINC00317-201ENST00000419069 FAM20CQ8IXL6 584 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 GSTCDQ8NEC7 633 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 CYP26B1Q9NR63 512 aa8.34□□□□□ -1.07
LINC00317-201ENST00000419069 CNTNAP5Q8WYK1 1306 aa8.33□□□□□ -1.08
LINC00317-201ENST00000419069 H0Y8X5 98 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms