RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-206ENST00000416651 MYOGP15173 224 aa10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 TAL1P17542 331 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 GRB14Q14449 540 aa10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 ATP2B3Q16720 1220 aa10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 PUS10Q3MIT2 529 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 TMEM31Q5JXX7 168 aa10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 TMEM240Q5SV17 173 aa10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 TBC1D9Q6ZT07 1266 aa10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 DZIP1Q86YF9 867 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 ANKS1AQ92625 1134 aa10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 CWC22Q9HCG8 908 aaKnown RBP10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 CXXC1Q9P0U4 656 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 SALL2Q9Y467 1007 aaPredicted RBP10.77□□□□□ -0.69
NIF3L1-206ENST00000416651 PRRC2BQ5JSZ5 2229 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L10C9JJH3 530 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 AXIN1O15169 862 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 AVPP01185 164 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 MRE11P49959 708 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 RABGGTBP53611 331 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 RASIP1Q5U651 963 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 CCDC102BQ68D86 513 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 ARRDC4Q8NCT1 418 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 SH3RF3Q8TEJ3 882 aaPredicted RBP10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 TMEM39AQ9NV64 488 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 GMPR2Q9P2T1 348 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 DENND2AQ9ULE3 1009 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 PA2G4Q9UQ80 394 aaKnown RBP10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 TACC3Q9Y6A5 838 aa10.76□□□□□ -0.69
NIF3L1-206ENST00000416651 MSCO60682 206 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 RPIAP49247 311 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 TIMM10P62072 90 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 C1orf53Q5VUE5 145 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 ZNF365Q70YC5 407 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 IL27Q8NEV9 243 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 ACER1Q8TDN7 264 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 AS3MTQ9HBK9 375 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 TOR4AQ9NXH8 423 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 PHF24Q9UPV7 400 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 RABGAP1Q9Y3P9 1069 aa10.75□□□□□ -0.69
NIF3L1-206ENST00000416651 A0A1W2PQ45 241 aaPredicted RBP10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 A0A1W2PQY0 241 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 EPOPA6NHQ4 379 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 SEPT4O43236 478 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 CSF2RAP15509 400 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 FECHP22830 423 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 ADORA2AP29274 412 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 CYP4X1Q8N118 509 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 USP44Q9H0E7 712 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 ZBTB21Q9ULJ3 1066 aa10.74□□□□□ -0.69
NIF3L1-206ENST00000416651 LRRC37A2A6NM11 1700 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 MYADML2A6NDP7 307 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 C19orf81C9J6K1 198 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 CD2BP2O95400 341 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 CATSPERGQ6ZRH7 1159 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 DPP9Q86TI2 863 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 MAPKAPK5Q8IW41 473 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 TEX11Q8IYF3 940 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 SLC44A5Q8NCS7 719 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 NSUN4Q96CB9 384 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 PHOX2BQ99453 314 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 MOV10L1Q9BXT6 1211 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 TBC1D2Q9BYX2 928 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 CERS4Q9HA82 394 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 SAP30BPQ9UHR5 308 aaKnown RBP10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 TBX21Q9UL17 535 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 PALD1Q9ULE6 856 aa10.73□□□□□ -0.69
NIF3L1-206ENST00000416651 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 GPR37L1O60883 481 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 ARHGEF15O94989 841 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 TIMP1P01033 207 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 GH2P01242 217 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 SKIV2LQ15477 1246 aaKnown RBP10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 KIAA1755Q5JYT7 1200 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L2Q6R6M4 530 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 SPRED2Q7Z698 418 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 ADGRA1Q86SQ6 560 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 PPP1R12CQ9BZL4 782 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 UMODL1Q5DID0 1318 aa10.72□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L15C9J2P7 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L13C9JLJ4 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L11C9JVI0 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L18D6R9N7 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L22D6RA61 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L17D6RBQ6 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L19D6RCP7 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L20D6RJB6 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 ASNSP08243 561 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 VCAM1P19320 739 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 USP17L24Q0WX57 530 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 NFX1Q12986 1120 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 CTC1Q2NKJ3 1217 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 OLFML2BQ68BL8 750 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 MFSD5Q6N075 450 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 TGFBRAP1Q8WUH2 860 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 VWCEQ96DN2 955 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 XPNPEP3Q9NQH7 507 aa10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 GNL3LQ9NVN8 582 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-206ENST00000416651 HMG20BQ9P0W2 317 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms