RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 PAGR1Q9BTK6 254 aa35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 TXNRD2Q9NNW7 524 aa35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 RBPJLQ9UBG7 517 aa35.69■■■■□ 3.3
CSNK1E-206ENST00000413574 PALM3A6NDB9 673 aaPredicted RBP35.68■■■■□ 3.3
CSNK1E-206ENST00000413574 C17orf99Q6UX52 265 aa35.68■■■■□ 3.3
CSNK1E-206ENST00000413574 SYNE3Q6ZMZ3 975 aa35.68■■■■□ 3.3
CSNK1E-206ENST00000413574 ZBTB43O43298 467 aa35.68■■■■□ 3.3
CSNK1E-206ENST00000413574 FAM160B2Q86V87 743 aa35.68■■■■□ 3.3
CSNK1E-206ENST00000413574 PRR12Q9ULL5 1215 aa35.68■■■■□ 3.3
CSNK1E-206ENST00000413574 FOXN1O15353 648 aa35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 PLA2G6O60733 806 aa35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 SNAP25P60880 206 aa35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 BTNL9Q6UXG8 535 aa35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 NOL8Q76FK4 1167 aaKnown RBP35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 ALDH8A1Q9H2A2 487 aaPredicted RBP35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 BTBD7Q9P203 1132 aa35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 ADAMTS5Q9UNA0 930 aa35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 MYPNQ86TC9 1320 aa35.67■■■■□ 3.3
CSNK1E-206ENST00000413574 GOLGA8BA8MQT2 603 aa35.66■■■■□ 3.3
CSNK1E-206ENST00000413574 CNMDO75829 334 aa35.66■■■■□ 3.3
CSNK1E-206ENST00000413574 GCLCP48506 637 aaPredicted RBP35.66■■■■□ 3.3
CSNK1E-206ENST00000413574 LBX2Q6XYB7 198 aa35.66■■■■□ 3.3
CSNK1E-206ENST00000413574 CTCFLQ8NI51 663 aaPredicted RBP35.66■■■■□ 3.3
CSNK1E-206ENST00000413574 KLRF2D3W0D1 207 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 VWA5AO00534 786 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 CALM1P0DP23 149 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 CALM2P0DP24 149 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 CALM3P0DP25 149 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 BCRP11274 1271 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 SYDE2Q5VT97 1194 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 FANCBQ8NB91 859 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 MAP3K14Q99558 947 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 BAZ2BQ9UIF8 2168 aaKnown RBP35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 NBPF11Q86T75 865 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 HPS5Q9UPZ3 1129 aa35.65■■■■□ 3.3
CSNK1E-206ENST00000413574 ECM2O94769 699 aaPredicted RBP35.64■■■■□ 3.3
CSNK1E-206ENST00000413574 EVCP57679 992 aa35.64■■■■□ 3.3
CSNK1E-206ENST00000413574 RABEP1Q15276 862 aa35.64■■■■□ 3.3
CSNK1E-206ENST00000413574 Q3C1V9 767 aa35.64■■■■□ 3.3
CSNK1E-206ENST00000413574 GPR25O00155 361 aa35.63■■■■□ 3.29
CSNK1E-206ENST00000413574 PDIA3P30101 505 aaKnown RBP35.63■■■■□ 3.29
CSNK1E-206ENST00000413574 SLC35G1Q2M3R5 365 aa35.63■■■■□ 3.29
CSNK1E-206ENST00000413574 CMTR1Q8N1G2 835 aaKnown RBP35.63■■■■□ 3.29
CSNK1E-206ENST00000413574 GOLGA8AA7E2F4 631 aa35.62■■■■□ 3.29
CSNK1E-206ENST00000413574 PLEKHA8P1O95397 391 aa35.62■■■■□ 3.29
CSNK1E-206ENST00000413574 TMEM132BQ14DG7 1078 aa35.62■■■■□ 3.29
CSNK1E-206ENST00000413574 REPS2Q8NFH8 660 aa35.62■■■■□ 3.29
CSNK1E-206ENST00000413574 VAT1LQ9HCJ6 419 aa35.62■■■■□ 3.29
CSNK1E-206ENST00000413574 TPCN1Q9ULQ1 816 aa35.62■■■■□ 3.29
CSNK1E-206ENST00000413574 RABGAP1Q9Y3P9 1069 aa35.62■■■■□ 3.29
CSNK1E-206ENST00000413574 ZSWIM8A7E2V4 1837 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 KIF5BP33176 963 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 ADGRF4Q8IZF3 695 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 GTF3C2Q8WUA4 911 aaPredicted RBP35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 SLC38A10Q9HBR0 1119 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 CDC27P30260 824 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 ERVK-9P63128 1117 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 ERVK-24P63145 666 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 FAM110CQ1W6H9 321 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 FAM217BQ9NTX9 383 aaPredicted RBP35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 MORF4L1Q9UBU8 362 aa35.61■■■■□ 3.29
CSNK1E-206ENST00000413574 METAP2P50579 478 aaKnown RBP eCLIP35.6■■■■□ 3.292e-6■■■■□ 21.2
CSNK1E-206ENST00000413574 STK3Q13188 491 aa35.6■■■■□ 3.29
CSNK1E-206ENST00000413574 PLS1Q14651 629 aa35.6■■■■□ 3.29
CSNK1E-206ENST00000413574 ANKRD1Q15327 319 aa35.6■■■■□ 3.29
CSNK1E-206ENST00000413574 RTN1Q16799 776 aa35.6■■■■□ 3.29
CSNK1E-206ENST00000413574 GPRC5AQ8NFJ5 357 aa35.6■■■■□ 3.29
CSNK1E-206ENST00000413574 MYH6P13533 1939 aa35.59■■■■□ 3.29
CSNK1E-206ENST00000413574 DHX16O60231 1041 aaKnown RBP35.59■■■■□ 3.29
CSNK1E-206ENST00000413574 ZBED4O75132 1171 aa35.59■■■■□ 3.29
CSNK1E-206ENST00000413574 HSPA8P11142 646 aaKnown RBP35.59■■■■□ 3.29
CSNK1E-206ENST00000413574 CCT2P78371 535 aaKnown RBP35.59■■■■□ 3.29
CSNK1E-206ENST00000413574 CPXCR1Q8N123 301 aa35.59■■■■□ 3.29
CSNK1E-206ENST00000413574 MB21D1Q8N884 522 aa35.59■■■■□ 3.29
CSNK1E-206ENST00000413574 SMCHD1A6NHR9 2005 aa35.59■■■■□ 3.29
CSNK1E-206ENST00000413574 CYTH3O43739 400 aa35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 CCDC174Q6PII3 467 aa35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 CCDC82Q8N4S0 544 aa35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 SRBD1Q8N5C6 995 aaKnown RBP35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 ZNF296Q8WUU4 475 aaPredicted RBP35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 ZNF274Q96GC6 653 aaPredicted RBP35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 JMJD4Q9H9V9 463 aa35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 NCOA5Q9HCD5 579 aaKnown RBP35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 RAVER2Q9HCJ3 691 aaKnown RBP35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 ZNF214Q9UL59 606 aaPredicted RBP35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 CASP8AP2Q9UKL3 1982 aa35.58■■■■□ 3.29
CSNK1E-206ENST00000413574 ADD1P35611 737 aaKnown RBP35.57■■■■□ 3.29
CSNK1E-206ENST00000413574 RCAN1P53805 252 aa35.57■■■■□ 3.29
CSNK1E-206ENST00000413574 SP3Q02447 781 aa35.57■■■■□ 3.29
CSNK1E-206ENST00000413574 RANBP17Q9H2T7 1088 aaKnown RBP35.57■■■■□ 3.29
CSNK1E-206ENST00000413574 CTDP1Q9Y5B0 961 aaPredicted RBP35.57■■■■□ 3.29
CSNK1E-206ENST00000413574 SPATC1LQ9H0A9 340 aa35.57■■■■□ 3.28
CSNK1E-206ENST00000413574 ZNF536O15090 1300 aa35.56■■■■□ 3.28
CSNK1E-206ENST00000413574 MGAMO43451 1857 aa35.56■■■■□ 3.28
CSNK1E-206ENST00000413574 LARGE1O95461 756 aa35.56■■■■□ 3.28
CSNK1E-206ENST00000413574 TAL1P17542 331 aaPredicted RBP35.56■■■■□ 3.28
CSNK1E-206ENST00000413574 CAP1Q01518 475 aa35.56■■■■□ 3.28
CSNK1E-206ENST00000413574 TMTC3Q6ZXV5 915 aa35.56■■■■□ 3.28
CSNK1E-206ENST00000413574 PIBF1Q8WXW3 757 aa35.56■■■■□ 3.28
CSNK1E-206ENST00000413574 SLC4A3P48751 1232 aa35.55■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 163.7 ms