RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 TOPAZ1Q8N9V7 1692 aa8.46□□□□□ -1.05
CSNK2A1-204ENST00000400227 FBLN1P23142 703 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 PPM1JQ5JR12 505 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 HDXQ7Z353 690 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 TMEM57Q8N5G2 664 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 PLPPR2Q96GM1 343 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 TBC1D32Q96NH3 1257 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 ZBTB40Q9NUA8 1239 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 KIF16BQ96L93 1317 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 PIK3R4Q99570 1358 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 MINDY4BA8MYZ0 360 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 SCAMP3O14828 347 aaKnown RBP8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 IPO8O15397 1037 aaKnown RBP8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 IGLV1-40P01703 118 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 ZNF853P0CG23 659 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 HCLS1P14317 486 aaPredicted RBP8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 CDK8P49336 464 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 NFIAQ12857 509 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 CYFIP1Q7L576 1253 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 NME9Q86XW9 330 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 SMC5Q8IY18 1101 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 SMYD4Q8IYR2 804 aaPredicted RBP8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 JARID2Q92833 1246 aaPredicted RBP8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 ZNF428Q96B54 188 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 PHACTR3Q96KR7 559 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 DAGLAQ9Y4D2 1042 aa8.45□□□□□ -1.06
CSNK2A1-204ENST00000400227 NALCNQ8IZF0 1738 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 PTCH1Q13635 1447 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 FANCGO15287 622 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 RNGTTO60942 597 aaKnown RBP8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 NTF4P34130 210 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 MLECQ14165 292 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 WIPI1Q5MNZ9 446 aaPredicted RBP8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 ZBTB37Q5TC79 503 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 SEZ6L2Q6UXD5 910 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 BNC2Q6ZN30 1099 aaPredicted RBP8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 ITPRIPQ8IWB1 547 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 ISL2Q96A47 359 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 DBNDD2Q9BQY9 259 aa8.44□□□□□ -1.06
CSNK2A1-204ENST00000400227 GFRA2O00451 464 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 VAMP4O75379 141 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 GARTP22102 1010 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 RPL6Q02878 288 aaKnown RBP8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 FAM160A1Q05DH4 1040 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 BECN1Q14457 450 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 GATAD2BQ8WXI9 593 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 RNF34Q969K3 372 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 KCNQ5Q9NR82 932 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 PICK1Q9NRD5 415 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 IFT57Q9NWB7 429 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 PRKAG2Q9UGJ0 569 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 PCOLCE2Q9UKZ9 415 aa8.43□□□□□ -1.06
CSNK2A1-204ENST00000400227 TNRQ92752 1358 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 ADAMTS13Q76LX8 1427 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 RGPD1P0DJD0 1748 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 PRAMEF27A3QJZ7 478 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 FAM221AA4D161 298 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 DYNC1LI2O43237 492 aaPredicted RBP8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 F13A1P00488 732 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 HMOX1P09601 288 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 EIF4A3P38919 411 aaKnown RBP8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 CALD1Q05682 793 aaKnown RBP8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 SNAP47Q5SQN1 464 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 ARHGAP45Q92619 1136 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 C1GALT1Q9NS00 363 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 TACC3Q9Y6A5 838 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 PRR36Q9H6K5 1346 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 TMEM2Q9UHN6 1383 aa8.42□□□□□ -1.06
CSNK2A1-204ENST00000400227 PEAK1Q9H792 1746 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 CILPO75339 1184 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 FRAT2O75474 233 aaPredicted RBP8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 GNAI1P63096 354 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 NUCB1Q02818 461 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 GOLM1Q8NBJ4 401 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 MFSD14AQ96MC6 490 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 THUMPD2Q9BTF0 503 aaKnown RBP8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 ANTXR1Q9H6X2 564 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 LGR6Q9HBX8 967 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 ROBO2Q9HCK4 1378 aa8.41□□□□□ -1.06
CSNK2A1-204ENST00000400227 RBM25P49756 843 aaKnown RBP8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 FBXL19Q6PCT2 694 aa8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 TSPYL6Q8N831 410 aa8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 GATA6Q92908 595 aa8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 COG3Q96JB2 828 aa8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 WNT10AQ9GZT5 417 aa8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 UPF2Q9HAU5 1272 aaKnown RBP8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 SSU72Q9NP77 194 aaKnown RBP8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 FMN2Q9NZ56 1722 aa8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 ABCC4O15439 1325 aa8.4□□□□□ -1.06
CSNK2A1-204ENST00000400227 GREM1O60565 184 aa8.39□□□□□ -1.07
CSNK2A1-204ENST00000400227 BPNT1O95861 308 aa8.39□□□□□ -1.07
CSNK2A1-204ENST00000400227 LMOD3Q0VAK6 560 aa8.39□□□□□ -1.07
CSNK2A1-204ENST00000400227 FAM196AQ6ZSG2 479 aa8.39□□□□□ -1.07
CSNK2A1-204ENST00000400227 ZAR1Q86SH2 424 aa8.39□□□□□ -1.07
CSNK2A1-204ENST00000400227 METTL16Q86W50 562 aaKnown RBP8.39□□□□□ -1.07
CSNK2A1-204ENST00000400227 KCT2Q8NC54 265 aa8.39□□□□□ -1.07
CSNK2A1-204ENST00000400227 ZNF507Q8TCN5 953 aa8.39□□□□□ -1.07
CSNK2A1-204ENST00000400227 ADAMTS1Q9UHI8 967 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms