RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 TEX13BQ9BXU2 312 aa22.97■■□□□ 1.27
COL11A2-204ENST00000395194 CTDP1Q9Y5B0 961 aaPredicted RBP22.97■■□□□ 1.27
COL11A2-204ENST00000395194 COPB2P35606 906 aa22.96■■□□□ 1.27
COL11A2-204ENST00000395194 ISY1Q9ULR0 285 aaKnown RBP22.96■■□□□ 1.27
COL11A2-204ENST00000395194 TTC41PQ6P2S7 1318 aa22.96■■□□□ 1.27
COL11A2-204ENST00000395194 PATL2C9JE40 543 aaKnown RBP22.95■■□□□ 1.26
COL11A2-204ENST00000395194 ERC2O15083 957 aa22.95■■□□□ 1.26
COL11A2-204ENST00000395194 ZNF865P0CJ78 1059 aaPredicted RBP22.95■■□□□ 1.26
COL11A2-204ENST00000395194 SH3RF1Q7Z6J0 888 aa22.95■■□□□ 1.26
COL11A2-204ENST00000395194 PRPF38AQ8NAV1 312 aaKnown RBP22.95■■□□□ 1.26
COL11A2-204ENST00000395194 DDX11Q96FC9 970 aa22.95■■□□□ 1.26
COL11A2-204ENST00000395194 RAVER2Q9HCJ3 691 aaKnown RBP22.95■■□□□ 1.26
COL11A2-204ENST00000395194 MTMR10Q9NXD2 777 aa22.95■■□□□ 1.26
COL11A2-204ENST00000395194 MTMR4Q9NYA4 1195 aa22.95■■□□□ 1.26
COL11A2-204ENST00000395194 DIS3Q9Y2L1 958 aaKnown RBP22.95■■□□□ 1.26
COL11A2-204ENST00000395194 SNX17Q15036 470 aa22.94■■□□□ 1.26
COL11A2-204ENST00000395194 LRRFIP1Q32MZ4 808 aaKnown RBP22.94■■□□□ 1.26
COL11A2-204ENST00000395194 NAPBQ9H115 298 aa22.94■■□□□ 1.26
COL11A2-204ENST00000395194 ZNF287Q9HBT7 754 aa22.94■■□□□ 1.26
COL11A2-204ENST00000395194 PDLIM7Q9NR12 457 aa22.94■■□□□ 1.26
COL11A2-204ENST00000395194 NRBP1Q9UHY1 535 aa22.94■■□□□ 1.26
COL11A2-204ENST00000395194 CNPY2Q9Y2B0 182 aa22.94■■□□□ 1.26
COL11A2-204ENST00000395194 ZBED4O75132 1171 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 TTLL1O95922 423 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 TSPY3P0CV98 308 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 TSPY8P0CW00 308 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 AKR1A1P14550 325 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 CCDC129Q6ZRS4 1044 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 RNF180Q86T96 592 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 BADQ92934 168 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 FAM161BQ96MY7 647 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 NACAP1Q9BZK3 213 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 ZHX1Q9UKY1 873 aaPredicted RBP22.93■■□□□ 1.26
COL11A2-204ENST00000395194 PHF24Q9UPV7 400 aa22.93■■□□□ 1.26
COL11A2-204ENST00000395194 MX1P20591 662 aa22.92■■□□□ 1.26
COL11A2-204ENST00000395194 TLE2Q04725 743 aa22.92■■□□□ 1.26
COL11A2-204ENST00000395194 PPARAQ07869 468 aa22.92■■□□□ 1.26
COL11A2-204ENST00000395194 ZMYM1Q5SVZ6 1142 aa22.92■■□□□ 1.26
COL11A2-204ENST00000395194 C9orf50Q5SZB4 431 aa22.92■■□□□ 1.26
COL11A2-204ENST00000395194 SLFN13Q68D06 897 aa22.92■■□□□ 1.26
COL11A2-204ENST00000395194 PLIN4Q96Q06 1357 aa22.91■■□□□ 1.26
COL11A2-204ENST00000395194 TRIM43BA6NCK2 446 aa22.91■■□□□ 1.26
COL11A2-204ENST00000395194 SNAI1O95863 264 aaPredicted RBP22.91■■□□□ 1.26
COL11A2-204ENST00000395194 TFAP4Q01664 338 aa22.91■■□□□ 1.26
COL11A2-204ENST00000395194 PDE4BQ07343 736 aa22.91■■□□□ 1.26
COL11A2-204ENST00000395194 MKL1Q969V6 931 aa22.91■■□□□ 1.26
COL11A2-204ENST00000395194 TRIM43Q96BQ3 446 aaPredicted RBP22.91■■□□□ 1.26
COL11A2-204ENST00000395194 SLC38A10Q9HBR0 1119 aa22.91■■□□□ 1.26
COL11A2-204ENST00000395194 HOMER2Q9NSB8 354 aa22.91■■□□□ 1.26
COL11A2-204ENST00000395194 FEM1BQ9UK73 627 aa22.91■■□□□ 1.26
COL11A2-204ENST00000395194 CUL9Q8IWT3 2517 aa22.9■■□□□ 1.26
COL11A2-204ENST00000395194 A0A1W2PQ45 241 aaPredicted RBP22.9■■□□□ 1.26
COL11A2-204ENST00000395194 A0A1W2PQY0 241 aa22.9■■□□□ 1.26
COL11A2-204ENST00000395194 SHHQ15465 462 aa22.9■■□□□ 1.26
COL11A2-204ENST00000395194 ANKRD35Q8N283 1001 aa22.9■■□□□ 1.26
COL11A2-204ENST00000395194 NEDD1Q8NHV4 660 aa22.9■■□□□ 1.26
COL11A2-204ENST00000395194 SYNRGQ9UMZ2 1314 aa22.89■■□□□ 1.26
COL11A2-204ENST00000395194 DNAJC25-GNG10A0A024R161 153 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 TMEM232C9JQI7 657 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 ATP2A1O14983 1001 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 PQBP1O60828 265 aaKnown RBP22.89■■□□□ 1.25
COL11A2-204ENST00000395194 ADAMTS4O75173 837 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 SLC3A2P08195 630 aaKnown RBP22.89■■□□□ 1.25
COL11A2-204ENST00000395194 BMP3P12645 472 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 CTDSPL2Q05D32 466 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 RASGRP2Q7LDG7 609 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 GMCL1P1Q8NEA9 526 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 INCENPQ9NQS7 918 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 STXBP5LQ9Y2K9 1186 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 UNC80Q8N2C7 3258 aa22.89■■□□□ 1.25
COL11A2-204ENST00000395194 SYNGAP1Q96PV0 1343 aa22.88■■□□□ 1.25
COL11A2-204ENST00000395194 MYADML2A6NDP7 307 aa22.88■■□□□ 1.25
COL11A2-204ENST00000395194 ITGB8P26012 769 aa22.88■■□□□ 1.25
COL11A2-204ENST00000395194 RRP1P56182 461 aaKnown RBP22.88■■□□□ 1.25
COL11A2-204ENST00000395194 IRX5P78411 483 aaPredicted RBP22.88■■□□□ 1.25
COL11A2-204ENST00000395194 IKQ13123 557 aaPredicted RBP22.88■■□□□ 1.25
COL11A2-204ENST00000395194 FAM184BQ9ULE4 1060 aa22.88■■□□□ 1.25
COL11A2-204ENST00000395194 MTMR7Q9Y216 660 aa22.88■■□□□ 1.25
COL11A2-204ENST00000395194 DLL1O00548 723 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 FOXP2O15409 715 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 ADCY6O43306 1168 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 CLTBP09497 229 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 ANKRD45Q5TZF3 282 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 C1orf53Q5VUE5 145 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 MAMDC4Q6UXC1 1216 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 MSL3Q8N5Y2 521 aaKnown RBP22.87■■□□□ 1.25
COL11A2-204ENST00000395194 FGD4Q96M96 766 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 CRBNQ96SW2 442 aa22.87■■□□□ 1.25
COL11A2-204ENST00000395194 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.87■■□□□ 1.25
COL11A2-204ENST00000395194 SALL3Q9BXA9 1300 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 CDH23Q9H251 3354 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 NMT2O60551 498 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 MCCP23508 829 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 VPS53Q5VIR6 699 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 KCTD1Q719H9 257 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 GUCD1Q96NT3 240 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 STARD7Q9NQZ5 370 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 ZBTB47Q9UFB7 747 aaPredicted RBP22.86■■□□□ 1.25
COL11A2-204ENST00000395194 STX8Q9UNK0 236 aa22.86■■□□□ 1.25
COL11A2-204ENST00000395194 EYSQ5T1H1 3165 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms